Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90749g00008 ATGGCTTCAACCCTTTTGAGAAGGACACTCTTGTGTTCTCGATTGATTCACCCTTCCCCTACTTTCCAACCTCAAACCTCACATATTCTCTCTTCCTTATCCACTAAGCGGCTGCTATTTAACGGAGCTGTCAAAACCCATACATTTCATAACCCAAAAATAATTGGTTGGATTCGGTGTATGGCTTTCTCCGCAGAAGCAAATTCAACAAGATCTGTATCCACAAATGAACCAGTTGTATCCGTTGATTGGCTTTATGATAACCTTAAGGATCCTTATGTGAAGGTGTTGGATGCATCGTGGTACATGCCGGATGAACAGAGGAACCCAATCCAAGAATATCAGGTTGCTCATATTCCTGGGGCCCTTTTCTTTGATGTTGATGGAATATCAGATCAAACTACAAAATTGCCACACATGTTGCCGTCAGAGGAGGCTTTTGCTGCCGCTGTTTCTGCTCTTGGCATAGAAAACAAAGATGATTTAGTTGTTTATGATGGAAAAGGACTATTTAGTGCTGCTCGTGTTTGGTGGATGTTCCGAGTTTTTGGTCACAATAGGATTTGGGTGTTAGATGGTGGCTTGCCAAGATGGCGTGCATCAGGTTACGATGTTGAATCCAGTGCCTCTAGCGATGCTATCCTTAAGGCTAGTGCTGCTAGTGAGGCTATTGAAAAAGTGTATCACGGGCAAGCGGTCGGCCCAATCACTTTCAAAACAAAGTTTCAGCCTCATCTTGTGTGGACACTTGATCAGGTTAAGAGAAATGTTGAAGAGAAGAGTCACCAACACATTGATGCTCGATCACAGGCCAGGTTTGATGGAGCTGCACCAGAACCAAGAAAGGGAATCCGAAGTGGTCATGTACCCGGCAGCAAATGCATTCCATTTCCCCAGTTGCTAGATGGTTCACAAGCATTGTTACCAGCAGATGAACTTAAGAAGCGATTTGAGCAAGCAGGCATCTCGTTGGACAGCTCTATTGTGACTTCTTGTGGAACAGGAGTAACTGCTTGCATTCTCGCATTGGGTCTCCACCGTCTTGGAAAAACTGATGTTGCCGTTTACGATGGATCATGGACAGAATGGGGAGCAAACCCTGATACTCCTGTTGAAACCTCATCTTCTTAA 1131 0.4456 MASTLLRRTLLCSRLIHPSPTFQPQTSHILSSLSTKRLLFNGAVKTHTFHNPKIIGWIRCMAFSAEANSTRSVSTNEPVVSVDWLYDNLKDPYVKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGISDQTTKLPHMLPSEEAFAAAVSALGIENKDDLVVYDGKGLFSAARVWWMFRVFGHNRIWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYHGQAVGPITFKTKFQPHLVWTLDQVKRNVEEKSHQHIDARSQARFDGAAPEPRKGIRSGHVPGSKCIPFPQLLDGSQALLPADELKKRFEQAGISLDSSIVTSCGTGVTACILALGLHRLGKTDVAVYDGSWTEWGANPDTPVETSSS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90749g00008 376 ProSitePatterns Rhodanese signature 1. 114 125 IPR001307 GO:0004792
Stsc90749g00008 376 FunFam Sulfurtransferase 72 214 - -
Stsc90749g00008 376 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 77 209 IPR036873 -
Stsc90749g00008 376 Gene3D - 243 369 IPR036873 -
Stsc90749g00008 376 SMART rhod_4 248 369 IPR001763 -
Stsc90749g00008 376 SMART rhod_4 80 204 IPR001763 -
Stsc90749g00008 376 MobiDBLite consensus disorder prediction 260 290 - -
Stsc90749g00008 376 Gene3D - 72 214 IPR036873 -
Stsc90749g00008 376 ProSitePatterns Rhodanese C-terminal signature. 353 363 IPR001307 GO:0004792
Stsc90749g00008 376 PANTHER THIOSULFATE SULFERTANSFERASE 74 374 IPR045078 GO:0016783
Stsc90749g00008 376 FunFam Sulfurtransferase 243 374 - -
Stsc90749g00008 376 CDD TST_Repeat_1 79 202 - -
Stsc90749g00008 376 ProSiteProfiles Rhodanese domain profile. 94 207 IPR001763 -
Stsc90749g00008 376 ProSiteProfiles Rhodanese domain profile. 258 372 IPR001763 -
Stsc90749g00008 376 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 251 374 IPR036873 -
Stsc90749g00008 376 Pfam Rhodanese-like domain 250 365 IPR001763 -
Stsc90749g00008 376 Pfam Rhodanese-like domain 81 200 IPR001763 -
Stsc90749g00008 376 CDD TST_Repeat_2 249 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90749g00008 Stsc-Chr90749 61848 68559 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90749g00008 69 376 Sulfurtransferasese or Rhodanese AT1G79230 79.221 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90749g00008 K01011 - gmx:100798053 596.66