Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90746g00015 ATGGGTCGTTACTACACGTTGTTCTTGAACACTTGTTTTCTTGTACTGGTTTGTGGTTTCATGATTGTTCATATGGACAACTTCGATATGAACAATCTTAACAACAACTACAACAAATCGTTTTCGAATAACATAACCACGGATCTAGATTGCAATACTTTACATAACTATGGCAACTACAGAGACAAGTGTTTGTACCTGAAATCCAACGACCCTTGCGTCTCCCAGGGCTACATAGATTACCTCTTCCTCTTCTACTGCAAATTTGGGAGGTTCCCTATTCTGGGTTATACACTTTTGTTTCTTTGGCTTCTTGTTTTGTTTTATATGCTCGCAAACACAACATCTCAGTATTTTTGTCCTTCACTCGAAACCCTCTCAAAGTTTCTGAGATTATCGCCAACAATTGCTGGGGTGACTCTTCTCTCCCTTGGCAATGGCGCCAGTGATGTCTTCTCAAGCCTTGTCTCGTTCCAGGGTAGTGGGACCCAGAGCATTGGCTTCAACACTGTTCTTGGTGGGGTTTTGTTTGTAACCTGTGTTGTTGTGGGGTCAGTTAGTATATCGATACGTAACAAAAGTGTTCGGGTTATGAAATCTGCGTTTGTTAGAGATGTGTGCTTTCTCCTCCTTGTTCTTTTGTTCTTGTTCAGCATCTTCATCAGTGGCGAGATCAACGTTCTTGGTGCAGTCGGTTTTACTCTTCTTTACGTGCTCTATGTGATTCTTGTTTACGTGTCTTCCAAGAAATGGAAGGTTGGTGATGTTGATGATGATGATGATCTGAACGGTCCACTTCTCAGTTCAATTGAAAAAGGGTTAATTGATAATCCTGAAAATAATGAAAACAAAAGAGAAAGATTCTGGTGGAGAAATTCCATTTATGTCCTTGAGATGCCACTTTACTTGCCAAGGAGGTTGACTATTCCGGTTGTTTGTGAAGAGAATTGGTCAAAGCCATTTGCTGTAGCTTCAGTGACACTAGCACCAGTTTTATTATGCATAATTTGGGCCCCTTTCAACCAAGAAAATTTAATCAGCACCTTTATTGTTTATGGAGTTGGTTTATTTGTTGGGATTGTGCTTGGAATAGCTGCAATTCTAACTACCAAGATGTCGGCGCCGCCGCAGAAGTGGTTGTTTCCGTGGCTTGCAGGAGGGTTTCTGATGAGTGTGACTTGGAGTTACATTTCAGCACAAGAATTGGTAGGGTTGCTAGTTTCAATTGGATACATTTTTGGGATTAGTCCTTCAATTCTAGGGCTAACTGTTCTTGCTTGGGGTAATTCACTTGGAGATTTAATGACCAATTTGACCCTGGCTATAAATGGTGGGTCTGAGGGTGCTCAAATTGCAATTTCAGGTTGCTATGCTGGACCCATTTTCAATACTCTTGTTGGATTGGGTTTGTCTCTTGTCACTTGCACTTGGTCACAGTACCCAGAAAATGTTGTGATTTCTAAAGATCCATATCTATGGGAGACAATGGCCTTTCTGGTTATTGGATTGATTTGGGCACTCTTTGTTTTGCTTAGAAAGGATATGAAGCTTAATGGACTCTTGGGATGGGGGCTTTTAGTAATTTACCTCGTTTCTCTGTTTCTCAGGCTGATTCAGACACAAGGGTCTCTACCACTTTATAATTAA 1647 0.4098 MGRYYTLFLNTCFLVLVCGFMIVHMDNFDMNNLNNNYNKSFSNNITTDLDCNTLHNYGNYRDKCLYLKSNDPCVSQGYIDYLFLFYCKFGRFPILGYTLLFLWLLVLFYMLANTTSQYFCPSLETLSKFLRLSPTIAGVTLLSLGNGASDVFSSLVSFQGSGTQSIGFNTVLGGVLFVTCVVVGSVSISIRNKSVRVMKSAFVRDVCFLLLVLLFLFSIFISGEINVLGAVGFTLLYVLYVILVYVSSKKWKVGDVDDDDDLNGPLLSSIEKGLIDNPENNENKRERFWWRNSIYVLEMPLYLPRRLTIPVVCEENWSKPFAVASVTLAPVLLCIIWAPFNQENLISTFIVYGVGLFVGIVLGIAAILTTKMSAPPQKWLFPWLAGGFLMSVTWSYISAQELVGLLVSIGYIFGISPSILGLTVLAWGNSLGDLMTNLTLAINGGSEGAQIAISGCYAGPIFNTLVGLGLSLVTCTWSQYPENVVISKDPYLWETMAFLVIGLIWALFVLLRKDMKLNGLLGWGLLVIYLVSLFLRLIQTQGSLPLYN 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90746g00015 548 Gene3D - 321 537 IPR044880 -
Stsc90746g00015 548 Gene3D - 132 256 IPR044880 -
Stsc90746g00015 548 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 282 543 - -
Stsc90746g00015 548 Pfam Sodium/calcium exchanger protein 101 245 IPR004837 GO:0016020|GO:0055085
Stsc90746g00015 548 Pfam Sodium/calcium exchanger protein 384 536 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90746g00015 Stsc-Chr90746 97885 99757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90746g00015 47 543 Antiporters AT5G17850 54.721 9.55e-175 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90746g00015 K13754 - gmx:100813848 672.544