Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90746g00010 ATGTCTGCTCTTGCGAATGGTTTTAAGTGCTCTAAATCAGACATTCTAAGAATCGTCCATATATGTGAAGCAACTTTGACCAAGCGGTTGGTTGAGTTTGAGAATACAGAGTCTGCTAGCTTGACAATTGAGGAGTTGAATACAATGGCAAAAGAGCATGAAAAGCAGCCAATTAAAGTACCAAAGGGTGATTTGAACCAATGTACTTCCGAAGATCTACTATGTGAGCACAAGGGTAAAGCTGTGCCTTATTTTGCACTTGGATTGTGTGAAACATGTTACAAGGATTTTGATAAACTCTCTGGTGGACTTGGTGGAGGTTTGGATCCTCCTGCTTTCCAGCGTGCTGAGAGGGAGAGAATGAGAAAATCAGATTCTGAGGAAAGTGCCAACGAAACAGATGATATGGTGAAAGAATCAAATGGTGAACATGGAAGCCGAAAAGAGGGATCACATGCCTCTGAGCCAAAAAGTGTTGGAGATAACTATGAGCACACAGCCACTAAAGATGGTGACCTTGACGAATCACACGAAGATGATATGAAGGATAAAACTAATGATGAATCAGAAAGTCTATCTGATATTGATGATCTAGAGGTTGATAGCTACCTTCACAATGAGGAGGAAAAACATTACAAGAAGATTATATGGGAAAATATGAATCGAGAATATCTCGAGGAACAAGCAGCTAAGGAAGCAGCTGCTGCAGCTGCTAAGAAATTTGCTGATGCAAATTGTTCCGAAGAGGAGCTGGCTGCTAGAGAATTTGCAAAATCAGCTGCTGATGCTGTGGCAAAGTCCAGAAAGGAAATGAAAGAAAAACGAGCTCAAGAGGCAAAAAATTCCGGTCCTGCTCAATCTGCTGTAGAGGCCACCCGGCAGATGTTGAGAACAAAGAGGCTCAGCTCCAAAGTCAATTATGATCGCTTGGAAAAGCTATTTGGTGATCCTGTGTCTACAGAGAAAGAGAATTCCAAGAAAGTACGATTTGATCCATCTTTGGATGAGCATGTTGAATCGAAATTAGAGGAAAATCCAAAGGATGATGATGCAGTAGGAACAGAGGATGAAATTGAGGATGGTGATAATATCGATATGACCGGAGAATATGAAGATAATATGTATCATGAAAATGGAGAAGAGGCATATGAAGATGAATATAATGACGATGGTGATTTTTGA 1182 0.4061 MSALANGFKCSKSDILRIVHICEATLTKRLVEFENTESASLTIEELNTMAKEHEKQPIKVPKGDLNQCTSEDLLCEHKGKAVPYFALGLCETCYKDFDKLSGGLGGGLDPPAFQRAERERMRKSDSEESANETDDMVKESNGEHGSRKEGSHASEPKSVGDNYEHTATKDGDLDESHEDDMKDKTNDESESLSDIDDLEVDSYLHNEEEKHYKKIIWENMNREYLEEQAAKEAAAAAAKKFADANCSEEELAAREFAKSAADAVAKSRKEMKEKRAQEAKNSGPAQSAVEATRQMLRTKRLSSKVNYDRLEKLFGDPVSTEKENSKKVRFDPSLDEHVESKLEENPKDDDAVGTEDEIEDGDNIDMTGEYEDNMYHENGEEAYEDEYNDDGDF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90746g00010 393 MobiDBLite consensus disorder prediction 313 348 - -
Stsc90746g00010 393 MobiDBLite consensus disorder prediction 267 291 - -
Stsc90746g00010 393 MobiDBLite consensus disorder prediction 105 200 - -
Stsc90746g00010 393 FunFam Cyclin/Brf1-like TBP-binding protein 185 235 - -
Stsc90746g00010 393 Pfam Brf1-like TBP-binding domain 193 314 IPR011665 -
Stsc90746g00010 393 MobiDBLite consensus disorder prediction 113 191 - -
Stsc90746g00010 393 Coils Coil 36 56 - -
Stsc90746g00010 393 MobiDBLite consensus disorder prediction 313 369 - -
Stsc90746g00010 393 Coils Coil 257 277 - -
Stsc90746g00010 393 Gene3D Single helix bin 184 235 - -
Stsc90746g00010 393 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 305 IPR000812 GO:0006352|GO:0070897
Stsc90746g00010 393 MobiDBLite consensus disorder prediction 374 393 - -
Stsc90746g00010 393 MobiDBLite consensus disorder prediction 349 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90746g00010 Stsc-Chr90746 55537 60914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90746g00010 1 299 Inorganic Solute Cotransporters AT2G01280 37.294 1.45e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90746g00010 K15196 - gmx:100789154 381.333