Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90746g00009 | ATGAGTGGTGCTGGGGACATGTCTGATAAGGATCCGGGTATCATGCTCTTTGGCATGAAGATTCCTTTGCAGGAGTTTCAGATTCCACCAGCCACCTCTCAAATGGGTTGTCAAATTCAGGCAAACTTTGCAGCCATGAATCCTTGTAGCAGCCTGAAGAAAACAGAAGTGGAAACTCACTCTGCACAAAACCCTGAGCAATCAAAGAATACTTGTGGTTTAAGCGAAGATACTAAACAAGAATCCAAGAACAATGAGCAAGGAAACGAGCTAAACCCGAATTCGAAGCCTTCGGAAGATAACGAGGAGAGTAGTAGTAACACAGATCAAGAGAAAAGTTTAAAGAAACCAGACAAGATTCTTCACTGTCCACGCTGCAACAGTTTGGAGACAAAGTTTTGTTATTTCAACAACTACAATGTGAATCAACCCCGGCATTTCTGCAAGAACTGCCAAAGGTATTGGACTGCTGGTGGTACAATGAGGAATGTTCCGGTGGGAGCCGGTAGACGGAAGAACAAGCACCTAGCCTCTCAATTCCGGCACATCATAGTAGCCTCCGAGGGAACTCCGGCCGCGAGGTTAGAAGCAAGAGATCACTCCTCTACAGACAATAATGGTGCTGTATTGAAATTTGGTCCAGATGTCCCTCTTTGTGAATCCATGGAGTCAATGCTTAATCTCCGAGACCAGAAAGCAAGTGGTGAACCAGCAAGATCATTGAGTTCTTCTGCAGAGAATCATGATCATCAAGAGTTATCTTTTTGTGCATCATCATCATCAGTGGAAATGAATTCTTGTAGTGCTGGAAATGAATCAATAGAGCAAAAGTGCAATTATCCTGTTCCTCCTCCTCCATGGATGTTTTCTTGGAATCCATCAGGTTGGAACAATGGTGGTTCCATGATGGCAGTCCATCAATCTCCGGCCGCAATGCAGTGGTGTCCGGCAACAATAATGGGAGTTCCAACCGTTTCTCCACCAAAAATTCCATGGCAATTTGTTCATGGATCATACTGGAATAATGGAACACCAGTGTGGCATGCACAAAATGCTGCAGTTTCCACCACTCCAAGTAACAGTTGCTGCTCCGGGAATGGCGGCTCCCCGGCGCTCGGAAAACACACCAGAGATAATAGTGTCTTCATGGAAGAAGAAGAGAAGTCGGAGATATGTGTTTTGGTTCCAAAGACCCTTAGAATTGATGGCCCAAATGAGAAGGCTTCAACAAGAAGTATGATGAAGCATGATAAGCACTTGTCTGAATCAGAAAATGGTGTTTTGAAAAAAGAACAAGGCAATGAGCGTGTGTTAGGTGTGTCTCAAATCTTGGAAGCTAACCCTGCAGCAGTTTCTCGTGCTCATGCGATTCAGGAGAGCACGTGA | 1386 | 0.4481 | MSGAGDMSDKDPGIMLFGMKIPLQEFQIPPATSQMGCQIQANFAAMNPCSSLKKTEVETHSAQNPEQSKNTCGLSEDTKQESKNNEQGNELNPNSKPSEDNEESSSNTDQEKSLKKPDKILHCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHLASQFRHIIVASEGTPAARLEARDHSSTDNNGAVLKFGPDVPLCESMESMLNLRDQKASGEPARSLSSSAENHDHQELSFCASSSSVEMNSCSAGNESIEQKCNYPVPPPPWMFSWNPSGWNNGGSMMAVHQSPAAMQWCPATIMGVPTVSPPKIPWQFVHGSYWNNGTPVWHAQNAAVSTTPSNSCCSGNGGSPALGKHTRDNSVFMEEEEKSEICVLVPKTLRIDGPNEKASTRSMMKHDKHLSESENGVLKKEQGNERVLGVSQILEANPAAVSRAHAIQEST | 461 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90746g00009 | 461 | MobiDBLite | consensus disorder prediction | 85 | 101 | - | - | |
Stsc90746g00009 | 461 | MobiDBLite | consensus disorder prediction | 357 | 376 | - | - | |
Stsc90746g00009 | 461 | MobiDBLite | consensus disorder prediction | 409 | 425 | - | - | |
Stsc90746g00009 | 461 | MobiDBLite | consensus disorder prediction | 56 | 78 | - | - | |
Stsc90746g00009 | 461 | ProSitePatterns | Zinc finger Dof-type signature. | 123 | 159 | IPR003851 | GO:0003677|GO:0006355 | |
Stsc90746g00009 | 461 | ProSiteProfiles | Zinc finger Dof-type profile. | 121 | 175 | IPR003851 | GO:0003677|GO:0006355 | |
Stsc90746g00009 | 461 | MobiDBLite | consensus disorder prediction | 56 | 116 | - | - | |
Stsc90746g00009 | 461 | PANTHER | CYCLIC DOF FACTOR 2 | 9 | 461 | IPR045174 | GO:0003700|GO:0006355 | |
Stsc90746g00009 | 461 | MobiDBLite | consensus disorder prediction | 403 | 425 | - | - | |
Stsc90746g00009 | 461 | MobiDBLite | consensus disorder prediction | 102 | 116 | - | - | |
Stsc90746g00009 | 461 | Pfam | Dof domain, zinc finger | 118 | 175 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90746g00009 | Stsc-Chr90746 | 51113 | 53716 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90746g00009 | 11 | 461 | C2C2-Dof Transcription Factor Family | AT5G39660 | 35.471 | 1.62e-66 | 218 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Stsc90746g00009 | zf-Dof | 6.9e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90746g00009 | - | - | aip:107621760 | 561.992 |