Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90746g00008 ATGGTGTTTGGAGACCTAAGGTTTGGCTTCTATAGCTTTAGCTGCCCAAATGCAGAGGCAATTGTTCGTGATGTTGTGCTAAGGCGTTTCAATAACGACAAATCCATAACCGCCGCCCTGCTTCGCATGCACTTTCATGATTGTTTTGTTACAGGTTGCGATGCGTCCTTACTAATAGATCCGAATCCAGCCAGAAACAAAACATCAGAGAAAAACGCAGGGCCGAAAATAACTGTTAGAGGATTTGACATAATCGATGAGGCTAAATCTGCACTGGAACAAGCTTGCCCTTCAACAGTTTCATGTGCAGATATCATATCACTGGCAACCAGAGATGCAGTGGCTTTGGCAGGAGGACCGACCTTCAATGTCCCCACTGGAAGAAGGGACGGTCTTGTGTCAGACCCAGCATTAGTGAAGCTTCCTGGGCCATCACTTTCGGTGTTGGAGGTTTTGAAATTCTTCACTGCAAAGGGGTTCTCACTGTTCGAAATGGTGGCACTCATGGCGGCTGGACATTCAGTTGGGAACGCCCACTGCAGCAACTTTCGTGACAGGCTTTCCAGCTTTAATAATGGAACTGTTGATCCCACCATGGATCCTAATTTGGATGCAAAATTGGTGCAGGTATGTGGATCATCAAGGCAGCCAGCAACAGACGATCCTCGTGTGTTTTTGGACATCACAACACCTCTTGCAATTGATACTCAATTTTTGAACCAAATTCTTCTGAAGAGAGGCATTCTTCACATCGATCAACAGCTAGCTTTGGACCCATTATCCAGTGACATGGTGTCACGTTTTGCGAGGGATAGTGATACCTTGTTTCAAACCTTTGCAAAAGCGATGATAAAATTATCAACTGTTAATGTTTTGGTTGGGGATCAAGGAGAGATTCGAAGGAACTATTTAAAGCTTGGCTTCTACAGCAGCAGCTGTCCAAATGCAGAGGCAATGGTTCGTGATGTTGTTCAGAGGCACTTCAACCAGGACAGATCCATAACCGCCGCCTTGCTTCGCATGCACTTTCACGATTGCTTTGTTAGAGGTTGTGATGCGTCGTTGCTAATAGATTCAACTGAGAACGAGTCATCGGAGAAAGACGCAGGGCCGAACCAGACCGTTCGGGGATTCGAAATCATTGACGAGGCTAAAACTCTCTTGGAAGAAAGTTGCCCTTCAACAGTCTCGTGTGCAGATATCATATCACTGGCAACCAGAGATGCAGTGGCCATGGCCGGTGGACCAGCTTACAATGTCTCGACGGGAAGAAGGGACGGGCTTTTTTCAAATCCAAAAGAAGTGAAACTTCCGTCGCCAACAATGTCGGTGTCTGAGGCTTTGGAGTTCTTCACTGCAAAGGGGTTTTCACTGTTCGAAATGGTGACACTCCTTGGAGGAGGACATTCCGTTGGGAACGCCCACTGCAGCAACTTTCAAGAGAGGCTTTCGAGCTTTAACAGAGGAAGTCCTGATCCCACCATGGATCCTGATTTGGATACAAGATTGGTGAAGGTATGTGGATCGTCAAGCCGGCCGGCGAGAAACGATCCGACGGTGTTTTTGGACGAAAAGACGCCTTTCGCATTTGATAATCGGTTTTATAACGAAATTCTTGATAAGAGAGGCATACTTCACATTGATCAGCAGCTGGCTATGGACTCATTGTCACGAGACATGGTGTCACGTTTTGCGGATGATGGTGACAGCTTATTTCAAAACTTTGCAAATGCAATGATAAAATTGTCAGCTGTTAATGTTTGGCTTGGGAATGAAGGAGAGATTCGAAAGAATTGTAGGGCTTTTAATAAGAATAATAATGAATGA 1827 0.457 MVFGDLRFGFYSFSCPNAEAIVRDVVLRRFNNDKSITAALLRMHFHDCFVTGCDASLLIDPNPARNKTSEKNAGPKITVRGFDIIDEAKSALEQACPSTVSCADIISLATRDAVALAGGPTFNVPTGRRDGLVSDPALVKLPGPSLSVLEVLKFFTAKGFSLFEMVALMAAGHSVGNAHCSNFRDRLSSFNNGTVDPTMDPNLDAKLVQVCGSSRQPATDDPRVFLDITTPLAIDTQFLNQILLKRGILHIDQQLALDPLSSDMVSRFARDSDTLFQTFAKAMIKLSTVNVLVGDQGEIRRNYLKLGFYSSSCPNAEAMVRDVVQRHFNQDRSITAALLRMHFHDCFVRGCDASLLIDSTENESSEKDAGPNQTVRGFEIIDEAKTLLEESCPSTVSCADIISLATRDAVAMAGGPAYNVSTGRRDGLFSNPKEVKLPSPTMSVSEALEFFTAKGFSLFEMVTLLGGGHSVGNAHCSNFQERLSSFNRGSPDPTMDPDLDTRLVKVCGSSSRPARNDPTVFLDEKTPFAFDNRFYNEILDKRGILHIDQQLAMDSLSRDMVSRFADDGDSLFQNFANAMIKLSAVNVWLGNEGEIRKNCRAFNKNNNE 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90746g00008 608 FunFam Peroxidase 438 582 - -
Stsc90746g00008 608 CDD secretory_peroxidase 304 602 IPR033905 GO:0004601|GO:0042744
Stsc90746g00008 608 ProSitePatterns Peroxidases active site signature. 37 48 IPR019794 GO:0004601
Stsc90746g00008 608 Pfam Peroxidase 320 567 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 Pfam Peroxidase 23 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 Gene3D - 307 603 - -
Stsc90746g00008 608 Gene3D Peroxidase, domain 2 438 582 - -
Stsc90746g00008 608 Gene3D Peroxidase, domain 2 142 286 - -
Stsc90746g00008 608 PANTHER - 304 603 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 ProSitePatterns Peroxidases active site signature. 335 346 IPR019794 GO:0004601
Stsc90746g00008 608 SUPERFAMILY Heme-dependent peroxidases 304 603 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 ProSiteProfiles Plant heme peroxidase family profile. 5 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 CDD secretory_peroxidase 6 302 IPR033905 GO:0004601|GO:0042744
Stsc90746g00008 608 PRINTS Plant peroxidase signature 414 429 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Plant peroxidase signature 460 472 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Plant peroxidase signature 521 536 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Plant peroxidase signature 395 405 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Plant peroxidase signature 577 590 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Plant peroxidase signature 337 357 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Plant peroxidase signature 376 389 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Plant peroxidase signature 313 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Plant peroxidase signature 537 554 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 FunFam Peroxidase 9 152 - -
Stsc90746g00008 608 PRINTS Haem peroxidase superfamily signature 523 538 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Haem peroxidase superfamily signature 461 476 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Haem peroxidase superfamily signature 335 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Haem peroxidase superfamily signature 414 426 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 PRINTS Haem peroxidase superfamily signature 396 413 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 FunFam Peroxidase 307 449 - -
Stsc90746g00008 608 ProSiteProfiles Plant heme peroxidase family profile. 303 603 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 SUPERFAMILY Heme-dependent peroxidases 5 303 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc90746g00008 608 FunFam Peroxidase 142 286 - -
Stsc90746g00008 608 Gene3D - 9 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90746g00008 Stsc-Chr90746 38437 46241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90746g00008 304 603 Peroxidase AT4G26010 55.667 3.76e-113 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90746g00008 K00430 - qlo:115949739 399.823