Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90744g00008 ATGGCTAACTTTGAAATAGATGAAGAGATATTGTCTTCAGAAACATATGGACAACAATCTGATGATCTTAAGGATTCTAATTTTCGAAAGCTTGTACTACGGACGAAACAAGCATCAATATCTGCCCCTGTGGTCTCTGTTGAGTCATATGCCACCGGTGGAAGTGGGAACCTTCTGCAACATAGTAGAGTTGTTACAAGAAGCAGAATGGTGGCAAACCGAACAGAAAAGTGCTCTAATGTTTGCAATACAAGTGAAAATCATTTGAAGAACAACCATGATAGGAACAATGAACACTTAATGATGTCTGGGCCCTTTGGATTGTGTGATTATCCTTGTTGTACTACCTGCCCTACCTACTTAAAGGCCACACAAAAAGGACATTCAAGAACATCAACCAGATTTAATTCCAAGTTACATAATGTTCATGGGGATGCCAGCCGTTTTGGAAGAAAAAAGCCCACTTTTTGCTCTTCATGTATTCCTGGAGTTATGAACCCTCACACCAAAGTTGTACAACAATGGAACATGATACACGCTCTCTTTTGCTGGGCGGCAATTATTTTGGATCCACTATTTCTCTTCTTATTCTATGTGCAGAGGCAGCAGGAGTACCCATGTATTGCAATTAACTCAACAATGACAGCGGCACTTGTTTCATTTAGAAGCATAAATGACCTTATGTTTTTATTAAACATTCTTGTCCAGTTTAGGCTGGCTTTTGTTTCTCGTGTTTCACCGGTAGACCATGTTGGATATTTAGTTGACCATCCAAAGAAAATTGTTCTACAGTACCTACGGGGTTTCTTTCTTTTTGATTTATTAGTCGTAATTCCTCTTCCTCAGATAATGGTACTTTTTGTCCTACCAAACAACTTGGGTTCTTGGAATCATCTGCTTGTAGCTATTCTCGTGCAGTATATCCCCAGATTGCATAGGTTTCTGCCTCTGCTAAATGGCCAGTCTCCAACAGGACTTGTATTTGAGTCAAAGTGGAAAAGTTTAATTAAGCATGTTCTCTTATTTTTGCTATCTGCTCATTTTGTTGGCTCTTGTGGGTATCTGTTTGCTCTACAGAGGGTTAGCCAATGTTTGAAAGTCACCTGCCAAGCTACTTTTATTAATGGATGTATGAATTTAATTGATTGTGGCCGTCAGACATCAAAAAATGTAATGTGGCAGGTCGGCACAAAAGCCAACAATTGCTTATTGACTACTTCTGCTTTTGATTATGGGATCTATACAAATCTTGTAAAACTTACCACGGAGAGTAATTGGGTCATGAAATATGTGTTTTCACTGTTTTGGGGTTTCACGCAAATTAGTAGTCTTGCTGGTAATGAAACCCCGAGCTATAATGGGTTGGAAGTCATTTTCACAATGGCAATCAGAGGAATGGGATTCTTTCTTTTGGCATTTCTAGTTGGTAGCATGCAAAACGTTCTTCAAGTTCCTAGACGGAGACTAGAAATGCAACTTAGAGGCCATGAGGTTGAGCAATGGATGTTCTATCGTCACCTACCAACAGATTTAAGAAGGCGAATAATCATGGCTGAACATTATAACTGGGCTGCAACTCAGGGTTTGAATGAAAAAATGCTTATGGAGAATATGCCAGATGATCTCCAGAGAGACCTAAGACGTCATTTTTTCTACTTTATTAAGAACGTTCGTCTTTTTGCCATGATGGATGAACCTATCCTGGATGCCATTCGTATGAGATTAAAGCAGAAGATATACATCAAAGGAAGCACCGTTATGTGTATGGGTGATCTTGTCGAGAGTATGGTCTTTGTTGTGCGTGGAGAATTGGAGAGTATTGGCAAAGATGAAATTAGAGTCCATTTATCTGAAGGTGATGCTTGTGGTGAGGAACTCCTGATTTGGTGTCTTGAAAAATTCTCAGTCAACACAGATGGTGGAAAAATATGGCTTCCTGAACAAAGTTTGCTTAGCAGCAGAACAGTAATTTGCTTAACAAATGTGGAGGCTTTTTCACTTCATGCAACTGACCTTGAAGAAGTGATAATTCTTTTTGCAAGATTCTTGCAAAGTCCACGTTTTCAACGAGCCATAAGGTATGAATTACCTTATTGGAGATCCTTTGCAGCTAGACGAATTCAGTTTGCATGGAGACATAAGAAGAATCCTCTGATTAGTGTTGCTTCACAATAG 2175 0.3931 MANFEIDEEILSSETYGQQSDDLKDSNFRKLVLRTKQASISAPVVSVESYATGGSGNLLQHSRVVTRSRMVANRTEKCSNVCNTSENHLKNNHDRNNEHLMMSGPFGLCDYPCCTTCPTYLKATQKGHSRTSTRFNSKLHNVHGDASRFGRKKPTFCSSCIPGVMNPHTKVVQQWNMIHALFCWAAIILDPLFLFLFYVQRQQEYPCIAINSTMTAALVSFRSINDLMFLLNILVQFRLAFVSRVSPVDHVGYLVDHPKKIVLQYLRGFFLFDLLVVIPLPQIMVLFVLPNNLGSWNHLLVAILVQYIPRLHRFLPLLNGQSPTGLVFESKWKSLIKHVLLFLLSAHFVGSCGYLFALQRVSQCLKVTCQATFINGCMNLIDCGRQTSKNVMWQVGTKANNCLLTTSAFDYGIYTNLVKLTTESNWVMKYVFSLFWGFTQISSLAGNETPSYNGLEVIFTMAIRGMGFFLLAFLVGSMQNVLQVPRRRLEMQLRGHEVEQWMFYRHLPTDLRRRIIMAEHYNWAATQGLNEKMLMENMPDDLQRDLRRHFFYFIKNVRLFAMMDEPILDAIRMRLKQKIYIKGSTVMCMGDLVESMVFVVRGELESIGKDEIRVHLSEGDACGEELLIWCLEKFSVNTDGGKIWLPEQSLLSSRTVICLTNVEAFSLHATDLEEVIILFARFLQSPRFQRAIRYELPYWRSFAARRIQFAWRHKKNPLISVASQ 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90744g00008 724 Gene3D Helix hairpin bin 487 551 - -
Stsc90744g00008 724 SUPERFAMILY Voltage-gated potassium channels 167 486 - -
Stsc90744g00008 724 Gene3D Jelly Rolls 557 681 IPR014710 -
Stsc90744g00008 724 Gene3D - 176 484 - -
Stsc90744g00008 724 SUPERFAMILY cAMP-binding domain-like 488 681 IPR018490 -
Stsc90744g00008 724 ProSiteProfiles cAMP/cGMP binding motif profile. 559 628 IPR000595 -
Stsc90744g00008 724 CDD CAP_ED 559 692 IPR000595 -
Stsc90744g00008 724 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 132 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90744g00008 Stsc-Chr90744 82915 92669 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90744g00008 20 637 Ion Channels AT3G17700 47.590 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90744g00008 K05391 - gsj:114390051 809.29