Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90743g00003 ATGGGGTGGCCTTGCATAGGGGAAACCCTCCAACTCTATTCTCAAGACCCCAATCTTTTCTTCTTTACCAAACAAAAAAGGTATGGTGAGATATTCAAGAGTAATATCCTTGGTTGTCCATGTGTGATGCTTACAAGCCCTGAGGCAGCAAGGTTTGTGTTAGTGACTCATTCTCACTTGTTTAAGCCAACATACCCAAAAAGCAAGGAACGTTTGATTGGCCCTTCTGCTTTGTTCTTCCACCAAGGTCAATACCATATGCTCCTTAGGAAGCTTGTTCAGAAGTCCCTCTCTCTTCAGTCACTCAAGAATTTGGTGCCTAAAATTGAGGCCTTAGCTCTTTCTTCCATGGAGAATTGGGCTCATCATCATCATAATAATAATAGTCATGTTGTTAACACTTTTAAGGAAATGAAAAGGTTCTCTTTTGATGTTGGTATCCTTACAATTTTTGGCTATCTAGAGCCACATTTGAAGGAGGAGCTAAAAAAGAATTACTGGATTGTGGACACAGGCTACAATTCTTTTCCATCTAACATTCCAAGAACACAATATCAAAAAGCACTCTTGGCAAGAAAGAAACTTGGGAAGATTCTATTTGAGATAATTTGTGAGAGAAAGGAGAAGAAATTGGTTGATAAAGATCTGTTGAGTTGTCTACTAAATTGGAAAGGTGAAGGAGGAGAAACTTTGAATGATGATCAAATTGCTGATAATATTATTGGAGTTCTTTTTGCTGCTCAAGACACCACAGCTAGTGTCATGACATGGATAGTAAAGTACTTCCATGATGAACCCAAGCTTCTAGAAAGTGTTAAGGCAGAACAAAAGGCTATTCAAAAGTCAAATGAAGAAGATAACCTTACATTGAGTTGGAACCAAACTAGAAACATGCCAATCACCTATAAGGTTGTGTTAGAAAGCTTGAGAATGTCAAGCATCATATCATTCCCTTTCAGAGAAGCAGTTGCTGATGTTGAGTACAAGGGGTTCCTCATACCAAAAGGGTGGAAAGCAATGCCATTGTTCAGAAATATTCATCACAATCCAGAATTTTTCTCTGAGCCTCAGAAATTCAACCCATCCAGGTTTGAGGTTGCACCAAAACCCAATACGTTCATGCCATTTGGAAGTGGAGTACATGCCTGCCCCGGTAATGAGCTAGCTAAGCTTGAGACAATGATTATGATCCATCATTTGGTCACCAAGTTTAGGTGGGAATTGGTAGGATCAGAATGTGGGATTCAATATGGGCCATTCCCATTGCCATTGAATGGACTTCCTACCAAATTTTGGAGAGAATCTACCACCTACAATTGA 1320 0.3955 MGWPCIGETLQLYSQDPNLFFFTKQKRYGEIFKSNILGCPCVMLTSPEAARFVLVTHSHLFKPTYPKSKERLIGPSALFFHQGQYHMLLRKLVQKSLSLQSLKNLVPKIEALALSSMENWAHHHHNNNSHVVNTFKEMKRFSFDVGILTIFGYLEPHLKEELKKNYWIVDTGYNSFPSNIPRTQYQKALLARKKLGKILFEIICERKEKKLVDKDLLSCLLNWKGEGGETLNDDQIADNIIGVLFAAQDTTASVMTWIVKYFHDEPKLLESVKAEQKAIQKSNEEDNLTLSWNQTRNMPITYKVVLESLRMSSIISFPFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPEFFSEPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETMIMIHHLVTKFRWELVGSECGIQYGPFPLPLNGLPTKFWRESTTYN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90743g00003 439 Pfam Cytochrome P450 3 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 SUPERFAMILY Cytochrome P450 2 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 376 385 IPR017972 GO:0005506|GO:0016705
Stsc90743g00003 439 Gene3D Cytochrome P450 1 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 PRINTS E-class P450 group I signature 383 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 PRINTS E-class P450 group I signature 373 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 PRINTS E-class P450 group I signature 235 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 PRINTS E-class P450 group I signature 342 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 PANTHER CYTOCHROME P450 26 1 419 - -
Stsc90743g00003 439 PRINTS P450 superfamily signature 374 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 PRINTS P450 superfamily signature 246 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90743g00003 439 CDD CYP90-like 25 430 - -
Stsc90743g00003 439 FunFam Abscisic acid 8 1 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90743g00003 Stsc-Chr90743 14397 20601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90743g00003 1 435 Cytochrome P450 AT3G19270 68.276 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90743g00003 K09843 - gmx:100779978 736.873