Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90740g00023 ATGTTGGATGGTGGTGCTAAATTCCCTGGAATCATAGACCTCAACAAGCATAATAACAACTATTATGATCTCTCCNNNNNNNNNNACAAGCTTGGGGAGGGTACCAATATGTCAATAGACAGTATAGGGAGCTTGCAAACAAGCAATGGTGGAGGATCTGTTGCGATGTCCGTTGACAACAGCAGTGTTGGGTCCAATGATTCCCATACTCGCATGTTGGATCACCAGGGTTTAAAGAGACGTGCAAATGATAACTACTCTGTTGCACATAGTGTCAATCGTCGAGGAAGAGTAACACATGCTTTGAGTGACGATGCCTTGGCTCAGGCTCTAATGGACAGCAGTTCTCCGACTGAGGGGCTTGACAATTTTGATGAGTGGACAATTGATTTGAGGAAGCTTAACATGGGCGAGCCTTTTGCGCAAGGAGCTTTTGGGAAACTCTACAGAGGCACGTACAATAGTGAAGATGTTGCTATCAAAATCTTGGAGAGGCCTGAAAATGATCCAGCAAAGGCTCAGTTGATGGAACAACAATTTCAGCAGGAAGTCATGATGCTGGCCACACTAAAGCACCCTAACATAGTTCGGTTCATTGGTGCCTGTCGTAAGCCGATGGTATGGTGCATTGTAACAGAGTATGCCAAAGGCGGTTCAGTTCGGCAATTTTTAACAAAGCGTCAACACCGATCTGTTCCCCTTAAATTGGCTGTCAAACAAGCTTTGGATGTTGCAAGGGGGATGGCATATGTTCATGGCCTGGGATTGATCCACAGGGACTTAAAATCTGACAATCTTCTAATTTTTGGTGACAAATCAATTAAAATTGCCGACTTTGGGGTTGCCCGGATTGAGGTGCAAACTGAAGGAATGACACCTGAGACTGGAACATATCGTTGGATGGCCCCGGAGATGATCCAGCATAGGCCTTATACTTCAAAAGTAGATGTATATAGCTTTGGGATTGTTCTTTGGGAGCTCATCACTGGATTGCTTCCATTTCAGAACATGACAGCAGTACAGGCAGCATTTGCAGTTGTCAACAGAAATGTTCGGCCAATCATTCCCAATGATTGCCTTCCTGTTCTTCGTGAGATCATGACCAGATGTTGGGATCCCAACCCTGATGTTAGGCCACTGTTTACTGAGATTGTAGGAATGCTTGAGAATGCAGAGATGGAGATCATGACGACAGTTCGGAAGGCCCGGTTTAGGTGTTGCATTACTCAACCAATGACTACTGACTGA 1248 0.4479 MLDGGAKFPGIIDLNKHNNNYYDLSXXXXKLGEGTNMSIDSIGSLQTSNGGGSVAMSVDNSSVGSNDSHTRMLDHQGLKRRANDNYSVAHSVNRRGRVTHALSDDALAQALMDSSSPTEGLDNFDEWTIDLRKLNMGEPFAQGAFGKLYRGTYNSEDVAIKILERPENDPAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQHRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTSKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNRNVRPIIPNDCLPVLREIMTRCWDPNPDVRPLFTEIVGMLENAEMEIMTTVRKARFRCCITQPMTTD 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90740g00023 415 Gene3D Phosphorylase Kinase; domain 1 123 216 - -
Stsc90740g00023 415 FunFam Serine/threonine-protein kinase isoform 1 124 216 - -
Stsc90740g00023 415 Pfam Protein tyrosine and serine/threonine kinase 135 387 IPR001245 GO:0004672|GO:0006468
Stsc90740g00023 415 ProSiteProfiles Protein kinase domain profile. 134 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90740g00023 415 CDD STKc_MAP3K-like 141 388 - -
Stsc90740g00023 415 Gene3D Transferase(Phosphotransferase) domain 1 217 410 - -
Stsc90740g00023 415 SUPERFAMILY Protein kinase-like (PK-like) 117 388 IPR011009 -
Stsc90740g00023 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Stsc90740g00023 415 PRINTS Tyrosine kinase catalytic domain signature 296 306 IPR001245 GO:0004672|GO:0006468
Stsc90740g00023 415 PRINTS Tyrosine kinase catalytic domain signature 359 381 IPR001245 GO:0004672|GO:0006468
Stsc90740g00023 415 PRINTS Tyrosine kinase catalytic domain signature 212 225 IPR001245 GO:0004672|GO:0006468
Stsc90740g00023 415 PRINTS Tyrosine kinase catalytic domain signature 250 268 IPR001245 GO:0004672|GO:0006468
Stsc90740g00023 415 PRINTS Tyrosine kinase catalytic domain signature 315 337 IPR001245 GO:0004672|GO:0006468
Stsc90740g00023 415 PANTHER SERINE-THREONINE PROTEIN KINASE 50 390 - -
Stsc90740g00023 415 MobiDBLite consensus disorder prediction 50 70 - -
Stsc90740g00023 415 FunFam serine/threonine-protein kinase HT1 217 410 - -
Stsc90740g00023 415 SMART serkin_6 134 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90740g00023 Stsc-Chr90740 97883 101945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90740g00023 30 415 MAP Kinase Kinase Kinase AT2G24360 80.829 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc90740g00023 PK_Tyr_Ser-Thr 1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90740g00023 - - gmx:100788536 776.933