Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90739g00001 ATGGGTGCTTGTTGGAGCAACCGGATTAAGGCTATTAATCCTTCCAACACAGGGTTCACTTCTAGAAGTGTCAGCAGGAATGGATATGACATCAGTTCAAGTAGCAGGAACTCATCTTCCTCCATTACTGTCCCTCCTCGAAGTGAGGGTGAGATCTTGCAGTCATCCAATTTGAAAAACTTTAGCTACAATGAGCTAAGAACAGCCACAAAGAATTTCCGGCCAGATAGTGTCTTAGGCGAGGGAGGGTTCGGTTCAGTTTTTAAGGGATGGATCGATGAGCATTCGATGGCTGCTACCAAACCAGGCATAGGAATGATTGTTGCTGTGAAGAGGCTTAACCCAGATGGTCTCCAGGGTCACAAGGAATGGTTGGCTGAAATAAACTATCTGGGACAACTTCAGCATCCTAATCTTGTCAAGTTGATAGGATACTGCTTGGAAGATGAGCACCGGCTTCTGGTTTATGAATTTATGCCTAAGGGAAGTGTGGAGAATCATCTGTTCAGAAGAGGTTCCTATTTCCAACCGTTCTCTTGGAATTTGCGGATGAAAATCGCCCTTGGGGCTGCACGAGGTCTTGCTTTTCTGCACAGTACAGAAGTTCAAGTCATATACCGCGACTTTAAGACAGCAAACATCCTCCTTGATACTAATTATAATGCCAAACTTTCTGATTTCGGGTTGGCCAGAGATGGTCCAACAGGTGATAGAAGCCATGTCTCTACTCGCGTCATGGGAACTCGGGGATATGCAGCGCCAGAGTATCTAGCAACAGGTCACCTCACTTCCAAGAGCGATGTGTATAGTTTCGGAGTAGTTCTTCTGGAAATGATATCAGGGAGAAAAGCAATAGACAAGAACCAACCAACTGGAGAGCACAACTTAGTTGAATGGGCCAAGCCTTATCTGTCTAATAAACGCAGAGTCTTTCGTGTAATGGATCCTCGTCTCGAAGGTCAATATTCCCAAACTCGAGCTCAGGCAGCAGCTGCCCTTGCAATGCAATGTCTTGCGGTCGAGTCTAAGGCCAGGCCGAATATGGACGAAGTGGTCAAAGCATTGGAGCAACTTCAGGAATCAAAAGACTCTCACAAAAGAAGCACTGCTCCAAAAGAACATCGCCGTGGTTCCAGCCATCTCAATGGCCATCCTGCTCCTGGCAAAGGCAGTGCAGATGCTCCCAAAACGGCTTCGGCTTATCCACGGCCCTCTGTTTCACTTCTTCAGTNNNNNNNNNNATCATTCGGCGAGAACCACACAGAACGAAACCAGTTCAGAGGTTTAGGGAGTTCTATGAACCATGTTTATGTAAGCAATGAAATGTATAGTTTCTGTTAG 1341 0.4586 MGACWSNRIKAINPSNTGFTSRSVSRNGYDISSSSRNSSSSITVPPRSEGEILQSSNLKNFSYNELRTATKNFRPDSVLGEGGFGSVFKGWIDEHSMAATKPGIGMIVAVKRLNPDGLQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDEHRLLVYEFMPKGSVENHLFRRGSYFQPFSWNLRMKIALGAARGLAFLHSTEVQVIYRDFKTANILLDTNYNAKLSDFGLARDGPTGDRSHVSTRVMGTRGYAAPEYLATGHLTSKSDVYSFGVVLLEMISGRKAIDKNQPTGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSQTRAQAAAALAMQCLAVESKARPNMDEVVKALEQLQESKDSHKRSTAPKEHRRGSSHLNGHPAPGKGSADAPKTASAYPRPSVSLLQXXXXSFGENHTERNQFRGLGSSMNHVYVSNEMYSFC 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90739g00001 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Stsc90739g00001 446 SUPERFAMILY Protein kinase-like (PK-like) 38 355 IPR011009 -
Stsc90739g00001 446 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Stsc90739g00001 446 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Stsc90739g00001 446 MobiDBLite consensus disorder prediction 23 48 - -
Stsc90739g00001 446 MobiDBLite consensus disorder prediction 350 380 - -
Stsc90739g00001 446 FunFam Probable serine/threonine-protein kinase PBL8 159 375 - -
Stsc90739g00001 446 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
Stsc90739g00001 446 PANTHER OS01G0588500 PROTEIN-RELATED 39 359 - -
Stsc90739g00001 446 Coils Coil 348 368 - -
Stsc90739g00001 446 Gene3D Transferase(Phosphotransferase) domain 1 159 380 - -
Stsc90739g00001 446 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90739g00001 446 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90739g00001 446 MobiDBLite consensus disorder prediction 350 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90739g00001 Stsc-Chr90739 6744 10162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90739g00001 49 363 Glycoside Hydrolase AT3G07070 51.266 5.64e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc90739g00001 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90739g00001 - - gmx:100819620 673.315