Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90738g00003 ATGGAAGGGCAAGAGGTTGTTGCAAATGGGAATAATAATGGCTCATTGAAATTGAAGCCAAGTAGCAGTGAGACCAGAGGGAAGAACATACAATGCAAAGCTGCGGTGGCTTATGGTCCTGGAGAAGCGTTTGTGTTGGAACAAGTTATTGTTCATCCTCCTCAGAAAATGGAGGTTCGGATCAAGATTCTATACACTTCCATATGTCATACCGATCTAGGATCTTGGAAAGCTGAGAATGAAGCTCAGCGTGCTTTTCCAAGGATTTTTGGGCATGAAGCTTCCGGGGTTGTGGAGTGTGTGGGAGAAGGAGTAACAGAGGTAAAAGAAGGGGACATAGTGGTACCAATATTCAATGGAGAATGTGGAGAATGCTGCTACTGCAAGAGTTGGGTAACAAACATGTGTGAGAGGTTTGGCGTGAACCCAATGAAGAAGGTGATGGATAGCGATGGCAAAACCAGGTTCACAACACTTGAAGGCAAACCCATTTACCATTTCTTGAACACCTCCACTTTTTCTGAGTACACCGTCGTTGACTCTGCTTGTGTGGTCAACATTCCACCTCAACTTGCTTCCAGTCTCAAACAACTTACCTTGATCAGTTGCGGTGTCTCCACCGGAGTTGGAGCTGCTTGGAACAGTGCAAATGTGAATGCTGGTTCCACTGTAGCAGTTTTTGGCTTAGGTGCTGTGGGGCTTGCTGTTGCAGAAGGGGCACGAGCTAGAGGTGCATCAAAAATAATAGGTGTGGATATCAATCCAGACAAATTCATCAAAGCCCAAGCTATGGGAATTACAGATTTCATAAATCCAAGAGATGAAGAGAAACCAGTGAATGAGAGAATCAAGGAAATGACTGGAGGAGGTGTAGACTACAGTTTTGAATGTGCTGGCAACTTGGATGTTCTAAGGGAAGCCTTCTTGTCTGCTCATGAGGGTTGGGGATTGACTGTAGTACTAGGAATTCACTCATCACCAAAATTGCTTCCAATTCACCCAATGGAGCTCTTCAATGGTCGCAGAATCATAGGATCAGTCTTTGGAGGTTTCAAAGGGAAAACCCAGTTGCCTCATTTTGCCAATGAATGCATACATGGAGTGGTGAATCTAGACAAGTTCATCACACATGAGCTTCCATTTGAGGAGATTAACAAAGCCTTTGATCTTCTGATTGCTGGGAAATCACTCAGATGTGTTCTACACCTCTAA 1212 0.4439 MEGQEVVANGNNNGSLKLKPSSSETRGKNIQCKAAVAYGPGEAFVLEQVIVHPPQKMEVRIKILYTSICHTDLGSWKAENEAQRAFPRIFGHEASGVVECVGEGVTEVKEGDIVVPIFNGECGECCYCKSWVTNMCERFGVNPMKKVMDSDGKTRFTTLEGKPIYHFLNTSTFSEYTVVDSACVVNIPPQLASSLKQLTLISCGVSTGVGAAWNSANVNAGSTVAVFGLGAVGLAVAEGARARGASKIIGVDINPDKFIKAQAMGITDFINPRDEEKPVNERIKEMTGGGVDYSFECAGNLDVLREAFLSAHEGWGLTVVLGIHSSPKLLPIHPMELFNGRRIIGSVFGGFKGKTQLPHFANECIHGVVNLDKFITHELPFEEINKAFDLLIAGKSLRCVLHL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90738g00003 403 Gene3D - 208 346 - -
Stsc90738g00003 403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 195 365 IPR036291 -
Stsc90738g00003 403 FunFam S-(hydroxymethyl)glutathione dehydrogenase 208 346 - -
Stsc90738g00003 403 SUPERFAMILY GroES-like 25 217 IPR011032 -
Stsc90738g00003 403 Pfam Alcohol dehydrogenase GroES-like domain 58 185 IPR013154 -
Stsc90738g00003 403 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 91 105 IPR002328 GO:0008270|GO:0016491
Stsc90738g00003 403 MobiDBLite consensus disorder prediction 1 24 - -
Stsc90738g00003 403 Gene3D - 35 398 - -
Stsc90738g00003 403 SUPERFAMILY GroES-like 353 402 IPR011032 -
Stsc90738g00003 403 Pfam Zinc-binding dehydrogenase 231 351 IPR013149 -
Stsc90738g00003 403 FunFam Alcohol dehydrogenase 6 35 220 - -
Stsc90738g00003 403 PANTHER ALCOHOL DEHYDROGENASE 27 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90738g00003 Stsc-Chr90738 12420 31035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90738g00003 58 392 Monolignol Biosynthesis Gene Families AT2G21890 28.824 1.03e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90738g00003 K00001 - gmx:100787307 604.364