Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90736g00011 ATGGCTTCTCTCTTACCTTGTGCGCCGCCTAACATAGTTTCCACTCCCTTCGGGAACCGGACTGGCCTCCCTCCCCTGAACCGTTCTCACTCCTACGCTCTTCCCGGTTCGACCAGGACCTTCCTCCGCGGCTCACTTTCGGTGGCCCGGTTCGGCTTCAAACCCGGGTTCTTGCCGGAGCCTGACGCTGCCGGAGAGGTGTTAAGGGAGTTGTTCGATAGGGCGGAGGGTTTCCTCTACACGATTGCCGATGCCGCCGTCTCGAATTCCGACGCGGCGGCGACGGCGACAACCACCGCCAAACAGAACAACGATTGGCTCTCCGGGATCACCAATTACATGGAAACTGTCCTCAAGGTACTCAAAGATGGACTTTCTACTTTGCATGCCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTCGTAAAAGCCGCCACCTTTCCATTGACAAAGAAACAGGTAGAATCTTCCCTGGCCATGCGATCACTGCAACCTCAAATAAAGGCTATCCAGCAACGTTATGCTGGTGATCAGGAGAAAATTCAACTTGAAACTGCTCGGTTGTATAAATTGGCCGGCATTAATCCTCTAGCAGGATGCTTGCCTACACTCGCAACAATACCAGTGTGGATTGGCCTATATCGAGCCCTTTCAAATGTGGCAGATGAGGGACTCCTTACAGAAGGTTTCTTCTGGATACCTTCTCTTGCTGGTCCAACAACGGTTGCGGCTCGTCAAAATGGAAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGACACATTGGCTTACCTTGTCTTGCCCGTGTTGCTGGTAGTCAGTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCCAATGATCCCAACATGAAGAGTTCTCAAGCCATCACCAAGCTCCTTCCATTAATGATTGGCTATTTTGCTCTTTCAGTTCCTTCTGGTCTAAGCCTTTATTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAATTAGGGGGAGCAAAAAATCCTATAGTTCAAATCCAAGATGATATTATGAAGGATGACCAAATGCAGATTCCAAAGTCGGTACCTAAAGTAAATTCCAGAAAAACAGAAGCTAGACAAGATGAGAAATCACCATCAGCGGGGCCAAAACCTGGTGAAAGATTTAGGCAACTAAAAGAGCAAGAGGCAAGGAAAAGACAACAAAGAGAAGAAGAAGGAAAAAGGAAAGCCGAGGAAGCAGCAGCTAAAGCAACTCAAGTATATGAGACTAATGAGAAAACAGTTGAAGAGGGAGATCGAGCTGGGGGTGATAATGTTGAAAAATCTCAGCATGTCGCTACTGATACTGATCCATCCACATCTCAGGTCACTGTAAATGGTAATCCACTAAGCAAGGACTTAGAAGAAAATCAGAATTCCACATCTACAGCTCAGAGGGAAAGTAATGAAGGTTCTCCTTTGAACAAGGGAGTAAATGGGAAAGGTGTAGACAAGGAACCAAGGGAAGCATTCACAACCACAGCTACCACCAACAAGCAACATCCTGAAGAAGAATCGGATCGTGCGGCAAAGGATTGA 1620 0.4691 MASLLPCAPPNIVSTPFGNRTGLPPLNRSHSYALPGSTRTFLRGSLSVARFGFKPGFLPEPDAAGEVLRELFDRAEGFLYTIADAAVSNSDAAATATTTAKQNNDWLSGITNYMETVLKVLKDGLSTLHAPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRSLQPQIKAIQQRYAGDQEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQAITKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPIVQIQDDIMKDDQMQIPKSVPKVNSRKTEARQDEKSPSAGPKPGERFRQLKEQEARKRQQREEEGKRKAEEAAAKATQVYETNEKTVEEGDRAGGDNVEKSQHVATDTDPSTSQVTVNGNPLSKDLEENQNSTSTAQRESNEGSPLNKGVNGKGVDKEPREAFTTTATTNKQHPEEESDRAAKD 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90736g00011 539 MobiDBLite consensus disorder prediction 437 453 - -
Stsc90736g00011 539 CDD 5TM_YidC_Alb3 135 348 IPR047196 -
Stsc90736g00011 539 MobiDBLite consensus disorder prediction 365 539 - -
Stsc90736g00011 539 Coils Coil 407 427 - -
Stsc90736g00011 539 NCBIfam membrane protein insertase YidC 134 348 IPR028055 -
Stsc90736g00011 539 Pfam 60Kd inner membrane protein 134 348 IPR028055 -
Stsc90736g00011 539 PANTHER OXA1 84 413 IPR001708 GO:0016020|GO:0032977
Stsc90736g00011 539 MobiDBLite consensus disorder prediction 379 429 - -
Stsc90736g00011 539 MobiDBLite consensus disorder prediction 459 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90736g00011 Stsc-Chr90736 81277 87301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90736g00011 71 416 Chloroplast and Mitochondria Gene Families AT2G28800 56.772 5.39e-132 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90736g00011 K03217 - gmx:100802546 734.947