Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90735g00013 ATGGAAGAAAAAGAGAATTTTGGTGATGTTAGTGCCGCAGAGAGCTTCCACGTGGCACCCAGAGTTGAGACCATAGATTTTTCCGGCGCCTCCACGCCGACGCCGGCGCCAGGGACGGGGACGGGGACCGATGGGAAGAAGAAGAGAGGAAGGCCTAGGAAGTACGGACCGGATGGGAAGCCAACGGCGGCAGCAGCGGGGGCGCTGTCTCCGATGCCGATATCGGCTTCAATTCCGTTGACCGGAGAGTTCTCAGGCTGGAAGAGGGGGAAAGGAAGGTCTGTTGAGTCCATCAAGAAGTCATCATTTAAGTATGACTTTGAAAGTCCAGGACCAGGACCAGGTGAGGGAATCCAATACTCAGTTGGTGCCAATTTTACACCACATGTACTTACTGTAAATGCTGGCGAGGATGTTACTATGAAGATTATGTCTTTTTCTCAACAAGGATCACGAGGTATATGTGTTCTCTCTGCAAATGGCACGATTTCAAATGTTACACTTCGTCAACCCACGTCTTCTGGGGGTACTTTAACATATGAGGGGCGATTTGAGATTCTTTCCTTGTCTGGTTCCTTTATGCCTACTGAGAATGGAGTTACGAAAAGCAGATCCGGTGGGATGAGCGTCTCTTTAGCTGGTCCAGATGGTCGAGTAATGGGAGGAGGACTCGCTGGTTTGCTGATAGCTGCCGGTCCTGTTCAGGTTGTTGTGGGTAGTTTTCTTCCCGGTCACCAGCTCGAGCATAAATCGAAGAAGCCTAGGATGGAACACATATCAACCGTTACGCCAACACACGTTACTCCTGTTGTCTCTAGTGACGAAATAAGAGTAAGTTTTGGTGGAGTAAAGCCTATAATGACACCTAGTGTATTTCATGGAGAGAACATTGTTTCCTTTAACAATGCTCAAGACTCTCGGAACTCGTCCGCTGATGATAAAGAACCATTGCCCGGAAAGGAGTCTAACCCAAGCCATACGAATGCGGAGATTGCATGCTAA 1002 0.489 MEEKENFGDVSAAESFHVAPRVETIDFSGASTPTPAPGTGTGTDGKKKRGRPRKYGPDGKPTAAAAGALSPMPISASIPLTGEFSGWKRGKGRSVESIKKSSFKYDFESPGPGPGEGIQYSVGANFTPHVLTVNAGEDVTMKIMSFSQQGSRGICVLSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSFMPTENGVTKSRSGGMSVSLAGPDGRVMGGGLAGLLIAAGPVQVVVGSFLPGHQLEHKSKKPRMEHISTVTPTHVTPVVSSDEIRVSFGGVKPIMTPSVFHGENIVSFNNAQDSRNSSADDKEPLPGKESNPSHTNAEIAC 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90735g00013 333 MobiDBLite consensus disorder prediction 23 70 - -
Stsc90735g00013 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 244 - -
Stsc90735g00013 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 241 IPR005175 -
Stsc90735g00013 333 Gene3D - 128 261 - -
Stsc90735g00013 333 CDD DUF296 127 241 IPR005175 -
Stsc90735g00013 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 24 313 IPR039605 GO:0003680
Stsc90735g00013 333 MobiDBLite consensus disorder prediction 301 333 - -
Stsc90735g00013 333 FunFam AT-hook motif nuclear-localized protein 1-like 128 259 - -
Stsc90735g00013 333 ProSiteProfiles PPC domain profile profile. 123 265 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90735g00013 Stsc-Chr90735 100275 105230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90735g00013 34 256 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 62.083 2.63e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90735g00013 - - gmx:100789179 472.241