Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90733g00007 ATGTTGTCTTTGAATGTTGTTTCACCCACATCATCCAGTGTCACTTTCACCAAACCCAATCACCAATCTTCCATTAATGCATCCACCATTTTCAGACCAAATCTCCTCAGCAAGGCTCACAGCCACAAGAACCTACCCTGCTTCAGAACCACCACCACTTCCCAGCTCCATGAACAAGGCTTCCAAAGTTCCAAGCTTTCTTTCATGCCCACATTTGAGATCCAAGATTCAATTACAAAGTTAGGATCTTTCAACAGGTTCCTCAGACACCCTATTGAGTCCAAAGCAAAACCTGTTAACCAAGTTGTGAAAGCAGCTTCTTCTGGTGCCACCAATCCTGAAGGAGGAGAAGAAAGTGTAGCAGCCCCCAAATCAAAGAACCTAAAGCTTGCACTGGTTTTTGGTCTATGGTACTTCCAAAACATCATCTTCAACATTTACAACAAGAAGGCCTTGAACATTTTCCCATTCCCATGGCTTCTAGCTTCATTCCAGCTTTTTGTTGGTTCCATTTGGATGCTAACTCTATGGACCTTAAAGCTCCAGCCATGTCCAAAAATCTCAAAGCCTTTCATCTTTGCACTTCTTGGACCTGCTTTGTTCCACACAATAGGCCACATCTCAGCTTGTGTTTCATTCTCTAAGGTTGCTGTTTCATTCACTCATGTAATCAAATCAGCAGAACCTGTTTTCTCTGTCATATTCTGTTCTGCCCTTGGTGATAGGTTCCCTATTCAGGTTTGGCTCTCAATTCTACCTATTGTTCTTGGTTGTTCTCTAGCTGCAGTAACTGAAGTGTCTTTCAACTTGCAAGGATTGTGGGGTGCCTNNNNNNNNNNTAGGAATATATATTCTAAGAGAAGTTTGCAGAGTTTCAAGGAGGTTGATGGATTGAACTTGTATGGTTGGATTACTATAATTTCATTGTTTTATTTGTTCCCTGTGGCTGTCTTTGTTGAAGGGTCTCAATGGATTCCAGGGTATTATAAGGCAATTGAAGCTATTGGAAAACCATCCACATTTTATATTTGGGTTTTGCTTTCTGGTGTGTTCTACCATCTCTATAACCAATCATCTTACCAAGCCTTGGATGAGATTAGCCCTTTAACTTTTTCGGTTGGGAACACGATGAAGCGAGTCGTGGTGATCGTTTCGTCGGTTTTGGTGTTCAGGAATCCGGTTAGACCACTTAATGGCCTAGGATCTGCCATTGCCATTCTTGGGACTTTCCTGTATTCGCAGGCAACTGCGAAGAAACCGAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1290 0.4178 MLSLNVVSPTSSSVTFTKPNHQSSINASTIFRPNLLSKAHSHKNLPCFRTTTTSQLHEQGFQSSKLSFMPTFEIQDSITKLGSFNRFLRHPIESKAKPVNQVVKAASSGATNPEGGEESVAAPKSKNLKLALVFGLWYFQNIIFNIYNKKALNIFPFPWLLASFQLFVGSIWMLTLWTLKLQPCPKISKPFIFALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFCSALGDRFPIQVWLSILPIVLGCSLAAVTEVSFNLQGLWGAXXXXRNIYSKRSLQSFKEVDGLNLYGWITIISLFYLFPVAVFVEGSQWIPGYYKAIEAIGKPSTFYIWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATAKKPKKIEGEKSS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90733g00007 429 Pfam Triose-phosphate Transporter family 128 413 IPR004853 -
Stsc90733g00007 429 PANTHER SOLUTE CARRIER FAMILY 35 129 418 - -
Stsc90733g00007 429 SUPERFAMILY Multidrug resistance efflux transporter EmrE 305 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90733g00007 Stsc-Chr90733 31011 32465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90733g00007 24 427 Antiporters AT5G17630 66.822 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90733g00007 K15283 - gmx:100101869 638.262