Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90733g00001 ATGAAGGAACAAGGAGGAGGAGGAGGAGGTGGTGGTGGGAGGAAGCAGGGTGCAGCATCACCATGTGCAGCATGCAAGCTTCTAAGGAGAAGGTGTGCACAAGATTGTGTATTTGCTCCCTATTTCCCAGCTGATGAACCTCACAAGTTTGCCAATGTTCATAGAGTCTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGACCTTCCAATGCATCAAAGAAGGGATGCAGTGAGTAGCATGGTGTATGAGGCCAATGCCAGAGTCCGAGACCCTGTTTATGGTTGTGTAGGTGCAATTTCTTCTCTTCAACAACAAATTGATGTCCTACAAACCCAATTGGCCATAGCCCAAGCTGAGGTGGTCCACCTTAGGATGCGCCAGCCCAATTGCCTTTCTAATGGGATGGGCCCAAGTAGCCCAACCAATAGTGGGTCCCCACCGTCCAAAGTTATGGACTCACAAGCCAAGCCATTTTTTGACATGGACATGGTGGTGGACCAGGCAAGCTATGGTGATTCAATGTGGTCATAA 534 0.4906 MKEQGGGGGGGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHRVFGASNVNKMLQDLPMHQRRDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQPNCLSNGMGPSSPTNSGSPPSKVMDSQAKPFFDMDMVVDQASYGDSMWS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90733g00001 177 MobiDBLite consensus disorder prediction 132 151 - -
Stsc90733g00001 177 Coils Coil 100 120 - -
Stsc90733g00001 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 141 - -
Stsc90733g00001 177 ProSiteProfiles LOB domain profile. 20 121 IPR004883 -
Stsc90733g00001 177 Pfam Lateral organ boundaries (LOB) domain 21 118 IPR004883 -
Stsc90733g00001 177 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90733g00001 Stsc-Chr90733 111 3674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90733g00001 14 177 AS2 family AT1G31320 78.443 6.48e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc90733g00001 LOB 1.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90733g00001 - - gmx:100794219 283.108