Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90732g00001 CATCATCATGAACCACCTTGGTCAGATCAAAAATGGCTATATGCTCCAGTGCTTGATTGCCACACCTCCCACATTGCTGTCAAGTTTGCTGAGCTTCTGACCAAGATTAACAGGCGATCTGGTAAGGAGCTTGAGAAGGAGCCCAAGATGAAGAATAGTGATGCCGGTCTTGTTAGGATGATTCCCACTAAGCCCATTGATGTTAGATTTGGTCATCTGGATGTAAAGCTCGGCGGCGGCAGCAAAGCAAAGCTTGGCGGCGGTGGCCCTCACCGTGTCTCTCTCTTCTATCTCTCTCTCTCTAAGTCTGTCTGA 315 0.4889 HHHEPPWSDQKWLYAPVLDCHTSHIAVKFAELLTKINRRSGKELEKEPKMKNSDAGLVRMIPTKPIDVRFGHLDVKLGGGSKAKLGGGGPHRVSLFYLSLSKSV 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90732g00001 104 PANTHER ELONGATION FACTOR 1 ALPHA 14 68 - -
Stsc90732g00001 104 Pfam Elongation factor Tu C-terminal domain 14 68 IPR004160 -
Stsc90732g00001 104 Gene3D Translation factors 5 70 - -
Stsc90732g00001 104 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 14 68 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90732g00001 Stsc-Chr90732 6851 7167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90732g00001 14 68 Eukaryotic Initiation Factors Gene Family AT1G07930 78.571 3.64e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90732g00001 K03231 - zof:121975510 99.7525