Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90731g00009 ATGGATTCACCATCAAAATCTCCCTCTCCGGTGTTTTCAGTGAAAAGGTGCAAACCAGAGCTGGTAGCTCCGGCATTGCCCACTCCCCACGAACTTAAACTGCTATCAGACATTGATGATCAACAAGGATTACGTTTCCAAATTCCAACCATATTTGTATACGATCACAATCCATCAATGGAAGGAAAAGATCCAGTGAAGGTGATAAGAGACGCAATCTCAAGAACACTTGTGTTTTACTACCCATTTGCCGGTAGGCTTAGGGAGGGTCATGGCGGCAAGTTGATGGTGGATTGCACTGCAGAGGGGGTCTTGTTCATTGAGGCCGATGCTGATGGGTGA 342 0.4649 MDSPSKSPSPVFSVKRCKPELVAPALPTPHELKLLSDIDDQQGLRFQIPTIFVYDHNPSMEGKDPVKVIRDAISRTLVFYYPFAGRLREGHGGKLMVDCTAEGVLFIEADADG 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90731g00009 113 Gene3D - 13 113 IPR023213 -
Stsc90731g00009 113 PANTHER ACYL TRANSFERASE 4 12 112 - -
Stsc90731g00009 113 Pfam Transferase family 13 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90731g00009 Stsc-Chr90731 48264 48605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90731g00009 21 111 Monolignol Biosynthesis Gene Families AT5G48930 36.264 1.00e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90731g00009 K19861 - cave:132185407 171.4