Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90730g00023 ATGTCTGATGTGCGCAAGCTTCATCCTTTGATTGATGAGTTCATACCAACGCTTCAAGGAGAGAATGGTATCTGTTATACACACCCAGAGAAGCTACCTGGAGTAAACAAAGATGGACAAATCCGGCACTTCTTTCATAGGCCTTCAAAAGCATACACTACAGGAACAAGGAAGAGAAGAAAGGTTCACACCGAAGAAGATGGAAGCGAAACAAGGTGGCACAAAACAGGAAAAACAAGGCCGGTTGTCGGCGGCGGCCTAGTGAAGGGTTTCAAGAAGATTCTAGTACTATATACAAACTATGGAAGGCAAAGAAAGCCTGAGAAAACTAACTGGGTGATGCATCAATACCATCTTGGAAGCAATGAAGAAGAGAGAGATGGAGAACTCGTTGTTTCAAAAGTGTTCTACCAAACACAGCCTAGACAATGCGGTAATTCCATTATCATAAAGGAAGATGATGATCTTCCCTATGAGAAGATATTGATGATGGATAATAGTAGTAGTAAGAAGCACAACAACAATAACAATGATGATGATGATATGAGAATACCTAGAAGAAATGCTGCTGCTGATGCTCCTGTTGTGGATTACTACATAAACTATGAGCATGTAGGGCATCATCAAAATCATAATCATAATAGAGAAAGTTGTTCATCTCATAATCAACTTATTCCAAACTTGGTTGTCCAAGGTGATGATTCATCTTCTCTTTATCATCGCTTTGCTTCTTCATCAGTGGATGGGAATGGAAACAAAGCAAGACTCATTGACAGAAACTTGTAG 786 0.3982 MSDVRKLHPLIDEFIPTLQGENGICYTHPEKLPGVNKDGQIRHFFHRPSKAYTTGTRKRRKVHTEEDGSETRWHKTGKTRPVVGGGLVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGSNEEERDGELVVSKVFYQTQPRQCGNSIIIKEDDDLPYEKILMMDNSSSKKHNNNNNDDDDMRIPRRNAAADAPVVDYYINYEHVGHHQNHNHNRESCSSHNQLIPNLVVQGDDSSSLYHRFASSSVDGNGNKARLIDRNL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90730g00023 261 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 226 IPR044799 GO:0003700
Stsc90730g00023 261 FunFam NAC domain-containing protein 73 1 142 - -
Stsc90730g00023 261 MobiDBLite consensus disorder prediction 52 79 - -
Stsc90730g00023 261 ProSiteProfiles NAC domain profile. 1 138 IPR003441 GO:0003677|GO:0006355
Stsc90730g00023 261 MobiDBLite consensus disorder prediction 58 77 - -
Stsc90730g00023 261 Pfam No apical meristem (NAM) protein 8 119 IPR003441 GO:0003677|GO:0006355
Stsc90730g00023 261 SUPERFAMILY NAC domain 11 138 IPR036093 GO:0003677|GO:0006355
Stsc90730g00023 261 Gene3D NAC domain 2 142 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90730g00023 Stsc-Chr90730 104992 108458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90730g00023 3 158 NAC Transcription Factor Family AT4G28500 79.747 2.47e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc90730g00023 NAM 7.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90730g00023 - - gmx:100795920 320.857