Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90730g00022 ATGGCATGGTGCAATGACAGTAATGAGAAAGAGAGGGGCAATGAAGATTTTACTACTATCCCTGCTCTTACACCTAAACCTAACCTAGAAATTCGAAACATAACTTGCCCCTCATGTGGTCATAACATTCAAATTCAAGAACAGGGTGGAATTCAAGACTTGCCGGGTTTACCAGCTGGAGTGAAGTTTGACCCGAACGACATTGAAATATTGGAGCATTTGGAGGCAAAGGTGATGTCTGATGTGCGCAAGCTTCATCCTTTGATTGATGAGTTCATACCAACGCTTCAAGGAGAGAATGGTATCTGTTATACACACCCAGAGAAGCTACCTGGAGTAAACAAAGATGGACAAATCCGGCACTTCTTTCATAGGCCTTCAAAAGCATACACTACAGGAACAAGGAAGAGAAGAAAGGTTCACACCGAAGAAGATGGAAGCGAAACAAGGTGGCACAAAACAGGAAAAACAAGGCCGGTTGTCGGCGGCGGCCTAGTGAAGGGTTTCAAGAAGATTCTAGTACTATATACAAACTATGGAAGGCAAAGAAAGCCTGAGAAAACTAACTGGGTGATGCATCAATACCATCTTGGAAGCAATGAAGAAGAGAGAGATGGAGAACTCGTTGTTTCAAAAGTGTTCTACCAAACACAGCCTAGACAATGCGGTAATTCCATTATCATAAAGGAAGATGATGATCTTCCCTATGAGAAGATATTGATGATGGATAATAGTAGTAGTAAGAAGCACAACAACAATAACAATGATGATGATGATATGAGAATACCTAGAAGAAATGCTGCTGCTGATGCTCCTGTTGTGGATTACTACATAAACTATGAGCATGTAGGGCATCATCAAAATCATAATCATAATAGAGAAAGTTGTTCATCTCATAATCAACTTATTCCAAACTTGGTTGTCCAAGGTGATGATTCATCTTCTCTTTATCATCGCTTTGCTTCTTCATCAGTGGATGGGAATGGAAACAAAGCAAGACTCATTGACAGAAACTTGTAG 1020 0.4049 MAWCNDSNEKERGNEDFTTIPALTPKPNLEIRNITCPSCGHNIQIQEQGGIQDLPGLPAGVKFDPNDIEILEHLEAKVMSDVRKLHPLIDEFIPTLQGENGICYTHPEKLPGVNKDGQIRHFFHRPSKAYTTGTRKRRKVHTEEDGSETRWHKTGKTRPVVGGGLVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGSNEEERDGELVVSKVFYQTQPRQCGNSIIIKEDDDLPYEKILMMDNSSSKKHNNNNNDDDDMRIPRRNAAADAPVVDYYINYEHVGHHQNHNHNRESCSSHNQLIPNLVVQGDDSSSLYHRFASSSVDGNGNKARLIDRNL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90730g00022 339 Pfam No apical meristem (NAM) protein 58 197 IPR003441 GO:0003677|GO:0006355
Stsc90730g00022 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 24 303 IPR044799 GO:0003700
Stsc90730g00022 339 Gene3D NAC domain 67 220 IPR036093 GO:0003677|GO:0006355
Stsc90730g00022 339 ProSiteProfiles NAC domain profile. 57 216 IPR003441 GO:0003677|GO:0006355
Stsc90730g00022 339 SUPERFAMILY NAC domain 51 216 IPR036093 GO:0003677|GO:0006355
Stsc90730g00022 339 FunFam NAC domain-containing protein 73 66 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90730g00022 Stsc-Chr90730 104992 109360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90730g00022 1 236 NAC Transcription Factor Family AT4G28500 68.421 1.99e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc90730g00022 NAM 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90730g00022 - - gmx:100783888 420.624