Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90730g00016 ATGGCAACCCTATTACTATACCTGAGTTATCATTGGCACTTAACATTGACTAACAAATCTACTTATTTATACAGGCTCATGCGCTTCTTGGTTCATGCTGGATTCTTTGTTACAACCAAGATTGATGGTGGAATAATGGGGTATGATCTTACACCCTCCTCAAGGCTCCTCCTCAAGAACAATGTCCCAACACTCTCTCCTTTTGTTCAAGCAATGTTACATCATTCTATACTTCACTCTCCTGAGTTCTTAGCAGAATGGTTCCACAGCAGTGGTGATCTCACTCCATTCCACACTGCATATGGCATGAGTTTTTGGGACTATACTGGCCAAAACAAAGAGTTTAATGGGCTCTTCATTGAAGCAATGATTAGTGATTCAGGGATGGCAAAGTTGGTTATCAAAGATTTGAAGTCTGTTTTTGAAGGACTGAATTCCATGGTTGATGTTGGAGGAGGCAAAGGAGGTATGGCTAGGCTGATTTCTGAGTCAGTGCCTGGCTTGCAGTGCACGGTTCTTGATCTTCCACATGTGGTTCAAAACTTGCAAGATACCAACAACCTTAAATTTGTTGGTGGTGACATGTTTGAAGCTATTCCTCCGGCTGATGCCGTTCTTCTTAAGTTAGTGTTGCATTGTCTTAATGATGAAGATTGCGGCAAGGTACTGAAGAAGTGCAAAGAAGCCATTTCAAGCAAAGGGAAGGAAGGAAAAGTGATAATCATAGACATAGTGATCAATGAGAATGATGATGATAAGCATGAATTGGCAGAAGCAAAGCTGTATTTTGATATGTTAATGATGACTTTGCTCCCTGGAAGGGAGAGGGAAGAGAAAGAATGGGAGAAGCTCTTCTTAGAAGCTGGATTCAGTCACTATAAGATTACACCCATCTTTGGGACGAGATCACTCATTCAAGTTTATCCTTGA 930 0.4118 MATLLLYLSYHWHLTLTNKSTYLYRLMRFLVHAGFFVTTKIDGGIMGYDLTPSSRLLLKNNVPTLSPFVQAMLHHSILHSPEFLAEWFHSSGDLTPFHTAYGMSFWDYTGQNKEFNGLFIEAMISDSGMAKLVIKDLKSVFEGLNSMVDVGGGKGGMARLISESVPGLQCTVLDLPHVVQNLQDTNNLKFVGGDMFEAIPPADAVLLKLVLHCLNDEDCGKVLKKCKEAISSKGKEGKVIIIDIVINENDDDKHELAEAKLYFDMLMMTLLPGREREEKEWEKLFLEAGFSHYKITPIFGTRSLIQVYP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90730g00016 309 PIRSF O-mtase 6 309 IPR016461 GO:0008168
Stsc90730g00016 309 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 64 307 IPR029063 -
Stsc90730g00016 309 Pfam O-methyltransferase domain 84 291 IPR001077 GO:0008171
Stsc90730g00016 309 CDD AdoMet_MTases 148 246 - -
Stsc90730g00016 309 Gene3D - 7 57 IPR036388 -
Stsc90730g00016 309 FunFam O-methyltransferase ZRP4 59 309 - -
Stsc90730g00016 309 Gene3D Vaccinia Virus protein VP39 59 309 IPR029063 -
Stsc90730g00016 309 SUPERFAMILY "Winged helix" DNA-binding domain 19 61 IPR036390 -
Stsc90730g00016 309 PANTHER O-METHYLTRANSFERASE 17 294 IPR016461 GO:0008168
Stsc90730g00016 309 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 309 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90730g00016 Stsc-Chr90730 57549 59092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90730g00016 23 295 Monolignol Biosynthesis Gene Families AT5G54160 31.915 2.20e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90730g00016 K22588 - qsa:O6P43_012698 367.081