Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90730g00015 ATGGATATCAACAAACTAGTACAGGGAGGAGCTGATGAAGTAGAGTTGCTGTTTGAGGCTCAGACCCATTTGTACAAATATACGTATCATTTCCTTGGTTCTTTGTGCCTCAAAACTGCAATCCAGTTGGGAATACCTGACATAATCCATAAGCATGGCAAACCTATCACTATATCTGAGTTAGTCTTGGCACTTAACATTGACTCTAACAAATCCACTTACCTATACAGGCTCATGCGCCTCTTGGTGCATGCTGGCATCTTTTCTAAAACCAAGGTTGATGAACAAGTGGGGTATGATCTCACACTTTCTTCTACTCTCCTCCTCAAAGAAAGTTTTCCAACTTTGCTTCCTCATGTTTGGGCAATGTTTCATCCTGCTATGCTTCACTCTCCTGAGTTCTTAGCAGAATGGTTTCACAGCAGCAGTGACCTCACTCCATTCCACACTGCAAATGGCATGAGTAATTGGGACTATATGAGCCAAAACAGAGAATTTAATGACCTCTTCACTGAAGCAATGATTAGTGATTCAGGGATGATGAAGTTGGTTATCAAAGATTTGAAGTCTGTTTTTGAAAGACTGAATTCCATGGTTGATGTTGGAGGAAGCAAAGGAGGTATGGCTAGGTTGATTTCTGAGTCACTTCCTGGCTTGCAGTGCACGGTTCTTGATCTTCCACATGTGGTTCAAAACTTGCAAGATACCAACAACCTGAAATTTGTTGCAGGTGACATGTTTCAGGTTATTCCTCCTGCTGATGCCATTCTTCTTAAGTTAGTCTTGCATAGTCTGAATGATGAAGACTGCATTAAGGTGCTGAAGAAGTGCAAGGAAGCCATCATTTCAAGCAAAGGGAAGGAAGGAAAAGTGATAATCATAGACATAGTGATCAATGAGAATGATGATGATAAGCATGAATTGGCAGAAGCAAAGCTGTATTTTGATATTTTAATGATGAGTGTAGTCCCTGGAAGGGAAAGGGAAGAGAAAGAATGGGAGAAACTCTTCTTGGAAGCTGGATTCAGTCACTATAAGATAACACCCATCTTTGGGATGAGATCACTCATTCAAGTTTATCCTTGA 1086 0.4079 MDINKLVQGGADEVELLFEAQTHLYKYTYHFLGSLCLKTAIQLGIPDIIHKHGKPITISELVLALNIDSNKSTYLYRLMRLLVHAGIFSKTKVDEQVGYDLTLSSTLLLKESFPTLLPHVWAMFHPAMLHSPEFLAEWFHSSSDLTPFHTANGMSNWDYMSQNREFNDLFTEAMISDSGMMKLVIKDLKSVFERLNSMVDVGGSKGGMARLISESLPGLQCTVLDLPHVVQNLQDTNNLKFVAGDMFQVIPPADAILLKLVLHSLNDEDCIKVLKKCKEAIISSKGKEGKVIIIDIVINENDDDKHELAEAKLYFDILMMSVVPGREREEKEWEKLFLEAGFSHYKITPIFGMRSLIQVYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90730g00015 361 PANTHER O-METHYLTRANSFERASE 18 346 IPR016461 GO:0008168
Stsc90730g00015 361 Gene3D - 8 108 IPR036388 -
Stsc90730g00015 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 359 IPR029063 -
Stsc90730g00015 361 Gene3D Vaccinia Virus protein VP39 112 361 IPR029063 -
Stsc90730g00015 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 361 IPR016461 GO:0008168
Stsc90730g00015 361 FunFam Coniferyl alcohol 9-O-methyltransferase 8 108 - -
Stsc90730g00015 361 Pfam O-methyltransferase domain 135 343 IPR001077 GO:0008171
Stsc90730g00015 361 FunFam O-methyltransferase ZRP4 110 361 - -
Stsc90730g00015 361 Pfam Dimerisation domain 36 83 IPR012967 GO:0046983
Stsc90730g00015 361 SUPERFAMILY "Winged helix" DNA-binding domain 15 111 IPR036390 -
Stsc90730g00015 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90730g00015 Stsc-Chr90730 54932 56379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90730g00015 35 347 Monolignol Biosynthesis Gene Families AT5G54160 29.448 4.59e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90730g00015 K22588 - qsa:O6P43_012698 426.402