Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90730g00007 ATGCTTCTTATTCAAGTTCTGCTTGTAGCAGCACAAACAAACAGCCAAGACTATAATGGCTTAGCAGCTTTTACAGGATTCTGGACTAACAGACCACCAAATTGGGTGGGAACAGATCCTTGTAGCACTAATTGGGAAGGAATTCGTTGCTCCAATTCAAGGATCACAGAATTGAAACTGTTAGGCATGAATTTGGAAGGTCAACTATCTTCAGCAATCAAGCAATTAACTGAGCTAGACACATTGGATCTTTCTTACAACCCTGGCTTGACAGGAACAATTCCACAAGAAATTGGGAGTTTGAAGAAGCTAAAATCCCTCGCATTGGTTGGTTGTGGTCTCTCTGGTCCTATACCAGACTCTATTGGAGCTTTGAAGCAACTAACCTTTCTAGCACTTAATATGAATCGGTTCAACGGAAGCATTCCGCGCTCCATTGGCAATCTATCTAGTCTCAATTGGCTTGATCTTTCTGATAATCAACTTGGAGGACAAATTCCTGTTTCTGATAACAAAGGAAGACCAGGACTTGACCTGCTACTTCAGGCTCAACACTTTCATATGGGGAACAATAAGCTCACCGGTCCATTACCGGAAAGCCTATTCAATTCCAGTATGGAACTAAAACATGTGCTTTTCGACAACAATCAACTGCAGGGTAGTATTCCCAGCTCCCTTGGTCAAGTGAGCACATTGGAGGTGGTGCGCTTAGATAACAACGGATTTAGCGGAGCAGTGCCTTCAACTTTGAAGAATCTTGGACATCTTAGTGAGCTGTATTTATCCAATAATAATAATCTGAATGGCTCTCTCCCAGACCTTACTGGATTGAATAGCCTCACCTATGTGGATATGAGCAACAATTCTTTCAACAGTTCTGATGTTCCTTCATGGGTTTCAAGTTTGCAATCTCTGACAACTGTGCTACTAGGGAACAACCAGTTGAGTGGCACATTGAATCTTACAGATGGATACAGTAGCAGTCTGCAGCTCATTGATTTGCAGAATAATGGAATAACAGATTACAAGCAAGGAAGCAAAAAGATCAATTTCCAAGTGGTGTTGTATGGTAATCCTGTTTGTCATGAATCTCAATCTCAACAACTGAGTTACTGCCAACTGCCTCTACAAACTCCTTCATACACAACACCACTAAACAATTGCTCCGCTCCATCCTGCGCTTCCGGTCAGGTTTCGAGTCCAAATTGTAAATGTGCATATCCCTATAGTGGAACACTCTTCTCCAGAGCTCTTAGTATCACAATCCTTAATGGTACTGATTACAAGGAGCTTGAGAAGTCTTTGTTGAATAGTTTTCAGTCCCAAAAGCTTCCTGTGGATTCAGTTTCTCTGAGTAATCCTACAAGGAATTCATCAAACAATAATTTTCAGTTGACTCTCAATGTCTTCCCATCTCAAACCGATCGTTTCAACAGAACCGGAGTTTCAAGTGTTGCTTTTGTGCTAAGTAACCAAATTTACAAGCCCCCGGAATTTTTCTCTCCTTACTTCTTCAATGGTCTCAACTATGAATATTATGGAGGAGAACCTAAATCAAAGTCAAACCATACTGGGGTTATAGTTGGTTCAGTAGTTGCTGTTTTGGTGTTTCTTGGATTAGCCTTCGCTGGAGGCACGTATGCCCTCCGCCAGAAAAGAAGAGCAGAAAGATCTGAACTCAATCCTTTTGCAAATTGGGAACAGAACCCGAATAGTGGAGCCGCTCCCCAGTTGAAAGGAGCTCGATGGTTTTCTTTCGAAGAGCTGAGGAAGTACACCAACAACTTCTCAGAAAACAATACTATTGGAAGTGGGGGCTATGGAAAGGTGTACCAAGGTGTTCTTCCTACTGGGGAAGTGGTTGCCATCAAGCGAGCTGGACAAGAATCTATGCAAGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTTTCAAGGGTCCACCATAAGAATCTTGTTAGTCTTGTGGGTTTCTGCTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGTACATTCCAAACGGTACCTTAATGGATAGTCTTACAGGAAAGTCTGGGATATCGATGGATTGGATCCGGAGGCTGAAAGTCACATTGGGCGCGGCGAGGGGTCTGGCATATCTTCATGAACTTGCTAACCCACCAATCATACACAGAGACATAAAATCAAGCAATATCCTACTTGATAGCCACCTTAATGCAAAAGTTGCTGATTTTGGTCTCTCAAAACTTCTTGTTGATAGTGAAAGAGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAATATTACATGAGCCAGCAATTGACTGAAAAGAGTGATGTATATAGCTTTGGAGTGGTAATGCTTGAGTTAGTAACAGCAAAAAGGCCAATAGAGCAAGGGAAGTATATTGTGAGAGAGGTAATGAGGGTAATGGATACATCAAAAGACTTATACAATCTTCAATCTATTGTTGATCCAACCATAATCCAAAGCACAAGCCCAAAGGGGTTAGAGAAGTATGTTGAAGTGGCAATGAGGTGTGTGAAAGAATATGCATCTGAGAGGCCTTCTATGGCTGAGGTTGTGAAAGAGATTGAGAACATAATCCAGCTTGCTGGTTTGAACCCCAATGCTGAATCAGCTTCCACAACAGAAAGTTATGAGGTGCCAAAGGGGGAAAATCTCAAACTCCCTTATGGCAATGAAGATTTTAGCTATACTGGAACTTTCCCAACAGCAAAGATAGAACCTCAATGA 2757 0.4193 MLLIQVLLVAAQTNSQDYNGLAAFTGFWTNRPPNWVGTDPCSTNWEGIRCSNSRITELKLLGMNLEGQLSSAIKQLTELDTLDLSYNPGLTGTIPQEIGSLKKLKSLALVGCGLSGPIPDSIGALKQLTFLALNMNRFNGSIPRSIGNLSSLNWLDLSDNQLGGQIPVSDNKGRPGLDLLLQAQHFHMGNNKLTGPLPESLFNSSMELKHVLFDNNQLQGSIPSSLGQVSTLEVVRLDNNGFSGAVPSTLKNLGHLSELYLSNNNNLNGSLPDLTGLNSLTYVDMSNNSFNSSDVPSWVSSLQSLTTVLLGNNQLSGTLNLTDGYSSSLQLIDLQNNGITDYKQGSKKINFQVVLYGNPVCHESQSQQLSYCQLPLQTPSYTTPLNNCSAPSCASGQVSSPNCKCAYPYSGTLFSRALSITILNGTDYKELEKSLLNSFQSQKLPVDSVSLSNPTRNSSNNNFQLTLNVFPSQTDRFNRTGVSSVAFVLSNQIYKPPEFFSPYFFNGLNYEYYGGEPKSKSNHTGVIVGSVVAVLVFLGLAFAGGTYALRQKRRAERSELNPFANWEQNPNSGAAPQLKGARWFSFEELRKYTNNFSENNTIGSGGYGKVYQGVLPTGEVVAIKRAGQESMQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGTLMDSLTGKSGISMDWIRRLKVTLGAARGLAYLHELANPPIIHRDIKSSNILLDSHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVVMLELVTAKRPIEQGKYIVREVMRVMDTSKDLYNLQSIVDPTIIQSTSPKGLEKYVEVAMRCVKEYASERPSMAEVVKEIENIIQLAGLNPNAESASTTESYEVPKGENLKLPYGNEDFSYTGTFPTAKIEPQ 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90730g00007 918 SMART serkin_6 596 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90730g00007 918 FunFam Leucine-rich repeat protein kinase family protein 563 671 - -
Stsc90730g00007 918 FunFam Leucine-rich repeat protein kinase family protein 173 273 - -
Stsc90730g00007 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
Stsc90730g00007 918 Gene3D Ribonuclease Inhibitor 175 390 IPR032675 -
Stsc90730g00007 918 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 672 881 - -
Stsc90730g00007 918 Gene3D Ribonuclease Inhibitor 21 174 IPR032675 -
Stsc90730g00007 918 PANTHER RECEPTOR-LIKE PROTEIN 55 31 868 - -
Stsc90730g00007 918 SUPERFAMILY Protein kinase-like (PK-like) 576 865 IPR011009 -
Stsc90730g00007 918 Gene3D Phosphorylase Kinase; domain 1 567 671 - -
Stsc90730g00007 918 FunFam Leucine-rich repeat family protein 16 171 - -
Stsc90730g00007 918 SUPERFAMILY L domain-like 31 362 - -
Stsc90730g00007 918 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Stsc90730g00007 918 CDD STKc_IRAK 602 868 - -
Stsc90730g00007 918 Gene3D Transferase(Phosphotransferase) domain 1 672 886 - -
Stsc90730g00007 918 Pfam Protein kinase domain 597 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90730g00007 918 ProSiteProfiles Protein kinase domain profile. 596 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90730g00007 Stsc-Chr90730 27505 32020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90730g00007 1 918 Receptor kinase-like Gene Family AT5G49760 53.376 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Stsc90730g00007 Pkinase 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90730g00007 - - gmx:100786172 1318.52