Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90729g00004 ATGCTAACCCTCAACCTCACTCCTCCTTCTTCCTCGTTCTCTGTTGTTCCCTTTCATGCCAATTATTCACTGTTTATACAAAATTCACAGTTATTGATTCCTTCCAATCTTAGTTACTCCTTTTCTGCTACAGCAACCAGAAAGTTGAAGACTTTTCAGCTCAAGGCTGGATTTTGGGAGTCAATTAAATCTGGGTTGATTAAGAACAACACTACGCAAGTTGTTGATCCACCAAATGCGGATGAAGAAGATGAAGAACCTATGCCTCAAGAGTTTGTCCTTGTTGAAAAGACTGAACCTGATGGAACAGTCGAGCAAATAATATTCTCTTCAGGTGGAGATATTGATGTTTATGACCTTCAAGCTCTTTGTGACAAGGTAGGGTGGCCACGGAGACCATTGTCGAAATTAGCTGCTGCTTTGAAAAATAGCTATATAGTGGCCTCATTGCATTCTGTAAGAAAGTCTCCGGGGTCAGAGGGGAATGAACAAAAGAGATTAATCGGCATGGCTCGTGCGACTTCAGACCATGCCTTCAATGCCACAATTTGGGATGTCCTAGTTGATCCTGCTTACCAGGGCCAAGGTCTTGGTAAAGCTCTTGTAGAGAAACTGATTCAAGCTCTTCTGCAAAAGGACATTGGCAATATAACTCTATTTGCAGATAGTAAAGTTGTGGATTTCTACCGGAATTTAGGTTTTGAAGCTGATCCTGAGGGCATAAAAGGCATGTTTTGGTACCCAAATTACTAG 753 0.417 MLTLNLTPPSSSFSVVPFHANYSLFIQNSQLLIPSNLSYSFSATATRKLKTFQLKAGFWESIKSGLIKNNTTQVVDPPNADEEDEEPMPQEFVLVEKTEPDGTVEQIIFSSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSVRKSPGSEGNEQKRLIGMARATSDHAFNATIWDVLVDPAYQGQGLGKALVEKLIQALLQKDIGNITLFADSKVVDFYRNLGFEADPEGIKGMFWYPNY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90729g00004 250 Gene3D - 111 247 - -
Stsc90729g00004 250 CDD NAT_SF 163 219 - -
Stsc90729g00004 250 FunFam Putative acetyltransferase NSI 111 247 - -
Stsc90729g00004 250 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 107 250 IPR000182 GO:0016747
Stsc90729g00004 250 PANTHER ACYL-COA N-ACYLTRANSFERASE 11 247 IPR045039 GO:0008080
Stsc90729g00004 250 Pfam Acetyltransferase (GNAT) family 117 234 IPR000182 GO:0016747
Stsc90729g00004 250 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 116 239 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90729g00004 Stsc-Chr90729 19460 23629 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc90729g00004 Acetyltransf_1 1.8e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90729g00004 K22450 - gmx:100799333 415.231