Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90726g00005 ATGGGGTACCTCTCTTTCTCTTGCAAAGCTGAATCCGCCGTTTCTACTTCCAATTCTCTCACACCATCACCTCCTCCTTCTTCTTCTTCTTCTCCTTCCACCACCTCAAAGAAACATAACAACAAAGAAAAAGAAAAACCCATCAAGATCCAACACTTCCATTACAGTGACCTTGAAGCTGCCACCAATGGCTTCTCAGACCGCAAGCTTCTCGGCAAAGGAAGCCATGGCTATGTCTATAAAGCTGTCCTACGTGGCCGTCCTGTTGCTGTCAAAAGACCATCAAGACCTCACCACCATAACCACCATCATCACAATTTGCCTCCAAAACCATCAATGGCTTCTTCTTCTACCACTTCTTCCTCTGCATCTGCATCTGCACCGGAGTTCATCATCAGCAGCAGCAGCAACGAGGTTGACAACGAGATCGATATCTTATCGAAAATCCAGAGCCCAAGGCTTGTGAATTTGGTTGGTTTCACAAACGATTCACAAGACAGGCTCTTGGTTGTTGAGTTCATGAGCAATGGAACACTCTATGATGTTCTTCATTCTTCACACAATAACAACAACAATAAGCTTCCCAATTGGGGAAGAAGGGTTCGTCTGGCATTGCAAACTGCAAAGGCAATCGACACCCTTCATTCATCAACACCACCTGTGATTCACAGAGATATTAAGTCAGCAAATGTTCTGATTGATAGAAACTTCAATGCAAGGTTAGGTGATTTCGGTTTGGCTCTTATGTGCCATGTTGATGATTATAGACTAAGGTCAACTCCACCAGCTGGAACAATGGGTTACCTTGATCCTTGTTATGTTACTCCTGATAATTTGAGCACTAAAAATGATGTCTTTAGTTTTGGGATTTTGTTGCTTGAGATTATTAGTGGAAGGAAAGCCATTGATGTGACATATTCACCACCTTCTATTGTGGATTGGGCTATTCCATTGATAAAGAAAGGGAAGCTTTTGAGTGTTTATGATCCAAGGATTGCTCCTCCTAAGGATCCTGTTGTGAGGAAGCAATTGGCTTTGATTGCTGCTAAGTGTGTTAGGAATTGCAGGGAGAGAAGGCCTTCAATGAGTGAGATTGTGAATTGGCTCAATGGTTTGTGTAAATTGGTTCCTCTTCATTCATGGAATGCTTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAGCAACAAGAAATCATGTTAATAGTAATAATCCCAAATCTTCAAGATTGGATCTTGATTTCTTGGATGAGAGGCTGTCTAAATCTGCAATGA 1314 0.4003 MGYLSFSCKAESAVSTSNSLTPSPPPSSSSSPSTTSKKHNNKEKEKPIKIQHFHYSDLEAATNGFSDRKLLGKGSHGYVYKAVLRGRPVAVKRPSRPHHHNHHHHNLPPKPSMASSSTTSSSASASAPEFIISSSSNEVDNEIDILSKIQSPRLVNLVGFTNDSQDRLLVVEFMSNGTLYDVLHSSHNNNNNKLPNWGRRVRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALMCHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKNDVFSFGILLLEIISGRKAIDVTYSPPSIVDWAIPLIKKGKLLSVYDPRIAPPKDPVVRKQLALIAAKCVRNCRERRPSMSEIVNWLNGLCKLVPLHSWNAFXXXXXXXXXXXXXXXXXXXXXXXQQQEIMLIVIIPNLQDWILISWMRGCLNLQ 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90726g00005 437 Pfam Protein tyrosine and serine/threonine kinase 134 368 IPR001245 GO:0004672|GO:0006468
Stsc90726g00005 437 ProSiteProfiles Protein kinase domain profile. 65 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90726g00005 437 PANTHER OS01G0253100 PROTEIN 30 372 - -
Stsc90726g00005 437 SUPERFAMILY Protein kinase-like (PK-like) 43 369 IPR011009 -
Stsc90726g00005 437 MobiDBLite consensus disorder prediction 14 36 - -
Stsc90726g00005 437 ProSitePatterns Protein kinases ATP-binding region signature. 71 92 IPR017441 GO:0005524
Stsc90726g00005 437 Gene3D Phosphorylase Kinase; domain 1 27 108 - -
Stsc90726g00005 437 SMART serkin_6 65 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90726g00005 437 Coils Coil 408 411 - -
Stsc90726g00005 437 FunFam Serine/threonine-protein kinase-like protein 174 382 - -
Stsc90726g00005 437 Gene3D Transferase(Phosphotransferase) domain 1 174 377 - -
Stsc90726g00005 437 MobiDBLite consensus disorder prediction 88 126 - -
Stsc90726g00005 437 MobiDBLite consensus disorder prediction 110 126 - -
Stsc90726g00005 437 MobiDBLite consensus disorder prediction 14 50 - -
Stsc90726g00005 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Stsc90726g00005 437 Gene3D Phosphorylase Kinase; domain 1 131 173 - -
Stsc90726g00005 437 MobiDBLite consensus disorder prediction 91 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90726g00005 Stsc-Chr90726 28238 30269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90726g00005 30 370 Receptor kinase-like Gene Family AT3G59420 40.401 8.92e-73 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Stsc90726g00005 PK_Tyr_Ser-Thr 1.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90726g00005 - - gmx:100819674 559.296