Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90725g00002 ATGTTGATGAAAGTGAATTCATCAAGTGATAGTGAGTGTCCATTGGGGAGTGACACATACAAATATAGTTGCCCCGAAGCAGAAGCAATAATATTCTCATGGGTTGAACAGGCTATCTCTCAAGACTCCAGAATGGCAGCCTCATTACTCAGGCTGCATTTCCATGATTGCTTTGGATGTGATGGTTCAGTTCTGTTAGATGACAGAGATGATTTCGTGGGCGAGAAGACAGCAGCTCCAAACCTCAATTCACTAAGAGGCTTTGAAGTGATAGATGGAATCAAATCTGAACTGGAATTAGTTTGTCCTCAAATTGTTTCTTGTGCTGATATATTGGCAACCGTTGCCCGAGATTCCGTCGTTCTGTCAGGAGGTCCAGCTTGGGAAGTCCAAATGGGAAGAAAAGATAGCATAAGTGCAAGCAAGGAAGCAGCAAATAATAACATACCAGCTCCAAACTCCACTGTTGATGTGCTCTTGGCTAAGTTCCAGAATGTGGGACTTAATCTTCAAGACATGGTGGCCTTATCAGGTGCGCACACCATCGGAAAAGCGCGGTGCCCGACATTTAGAAGTCGGCTAGAGAGTAGAAGTGACTCATCAGATGTGAATATGGAATTCATAGAGTCGTTGCAAGAGCTGTGCTCAGGAGGAGATAACACAAACAAAGTAGCACACCTTGACCTCGCTACACCAGCAACATTTGACAACCAGTACTACGTTAATCTACTCTCTGGGGAGGGGCTACTCCCCTCAGACCAAGCCCTCCTTAACGGGAATGATCAAACACGACAAATTGTTCAAACCTATGCCGTCGATCCATCTGCTTTTTATGAGGACTTCAAATATTCAATGGTGAAGATGGCTAGTTTGGGTTCCCTTACTCAAATTGACGGCCAGATTCGAAGGGACTGCCGAACTATAAACTAA 930 0.4462 MLMKVNSSSDSECPLGSDTYKYSCPEAEAIIFSWVEQAISQDSRMAASLLRLHFHDCFGCDGSVLLDDRDDFVGEKTAAPNLNSLRGFEVIDGIKSELELVCPQIVSCADILATVARDSVVLSGGPAWEVQMGRKDSISASKEAANNNIPAPNSTVDVLLAKFQNVGLNLQDMVALSGAHTIGKARCPTFRSRLESRSDSSDVNMEFIESLQELCSGGDNTNKVAHLDLATPATFDNQYYVNLLSGEGLLPSDQALLNGNDQTRQIVQTYAVDPSAFYEDFKYSMVKMASLGSLTQIDGQIRRDCRTIN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90725g00002 309 PANTHER PEROXIDASE 72-RELATED 15 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 FunFam Peroxidase 18 159 - -
Stsc90725g00002 309 SUPERFAMILY Heme-dependent peroxidases 15 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Plant peroxidase signature 105 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Plant peroxidase signature 171 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Plant peroxidase signature 86 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Plant peroxidase signature 124 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 Pfam Peroxidase 35 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 ProSitePatterns Peroxidases active site signature. 46 57 IPR019794 GO:0004601
Stsc90725g00002 309 Gene3D Peroxidase, domain 2 150 289 - -
Stsc90725g00002 309 Gene3D - 20 309 - -
Stsc90725g00002 309 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Haem peroxidase superfamily signature 124 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Haem peroxidase superfamily signature 106 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 PRINTS Haem peroxidase superfamily signature 172 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 ProSiteProfiles Plant heme peroxidase family profile. 14 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90725g00002 309 FunFam Peroxidase 150 288 - -
Stsc90725g00002 309 CDD secretory_peroxidase 20 306 IPR033905 GO:0004601|GO:0042744
Stsc90725g00002 309 ProSitePatterns Peroxidases proximal heme-ligand signature. 172 182 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90725g00002 Stsc-Chr90725 16957 18238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90725g00002 20 309 Peroxidase AT4G16270 62.838 5.04e-134 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90725g00002 K00430 - gmx:100787637 485.723