Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90724g00013 ATGATGATGATGGCTACTACTACTACTACTGCAGGTGATGATGAAAGGGTGAAGCAGCTTCCTCCTGGGTTTTTGTTCTCTCCAACGGATGAAGAACTTGTTCTTCACTTTCTATATTCTAAGGAGGCTTCTCTTCTTCCATGCCATCCCAACATCATTCCTGATCTTGATCTATCTCTCTCTGATCCTTTTCAACTCAACGGTAAAGCGTTGTCAAGTGGAAATCAATACTATTTCTTCAGCAAAGTGAAGGAAAAAAGAGAAACAGAAAATGGGTATTGGAAGGAAATAGGTGAAAGCGAAGAAGCTATAATGTCATCATCAGCAGCAGCAGTTGAGAAGAAAGTAGTAGGGACAAAGAAGAAGCTGGTATTCCACATAGGAGAAGCTCCACACGGCATTGAAACCACTTGGCTCATGCAAGAATATCGTATTTCTCCATCCTCTTCTACTGACATTTTTGCTATTAGCAATAGAGTTAGAAGAAAACACGATCATGATGAGAGTTGGAGCAAATGGGTTTTGTGCAGAGTGTATGAAAAGAAGATGTCCGTACGAGGTATAAACTACTCTAGTGATGATGACGGCGAAGATTACGACGACAGTGGGACAGAGCTATCTTGGCTTGACGAAGTTTATCTCTCTTTGGATGATGATCTTCAAGAAATAAGCATCTCCATTTTAGATTGA 690 0.4058 MMMMATTTTTAGDDERVKQLPPGFLFSPTDEELVLHFLYSKEASLLPCHPNIIPDLDLSLSDPFQLNGKALSSGNQYYFFSKVKEKRETENGYWKEIGESEEAIMSSSAAAVEKKVVGTKKKLVFHIGEAPHGIETTWLMQEYRISPSSSTDIFAISNRVRRKHDHDESWSKWVLCRVYEKKMSVRGINYSSDDDGEDYDDSGTELSWLDEVYLSLDDDLQEISISILD 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90724g00013 229 Gene3D NAC domain 29 185 IPR036093 GO:0003677|GO:0006355
Stsc90724g00013 229 PANTHER NAC TRANSCRIPTION FACTOR 56 19 185 - -
Stsc90724g00013 229 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Stsc90724g00013 229 SUPERFAMILY NAC domain 19 181 IPR036093 GO:0003677|GO:0006355
Stsc90724g00013 229 Coils Coil 225 229 - -
Stsc90724g00013 229 ProSiteProfiles NAC domain profile. 20 181 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90724g00013 Stsc-Chr90724 80361 82868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90724g00013 20 189 NAC Transcription Factor Family AT1G69490 38.202 3.32e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc90724g00013 NAM 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90724g00013 - - adu:107470472 305.064