Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90724g00012 ATGAAATTTATGATATATATTCCAAGTGATGATGAAAGGGTGAAGCAGCTTCCTCCTGGGTTTTTGTTCTCTCCAACGGATGAAGAACTTGTTCTTCACTTTCTATATTCTAAGGAGGCTTCTCTTCTTCCATGCCATCCCAACATCATTCCTGATCTTGATCTATCTCTCTCTGATCCTTTTCAACTCAACGGTAAAGCGTTGTCAAGTGGAAATCAATACTATTTCTTCAGCAAAGTGAAGGAAAAAAGAGAAACAGAAAATGGGTATTGGAAGGAAATAGGTGAAAGCGAAGAAGCTATAATGTCATCATCAGCAGCAGCAGTTGAGAAGAAAGTAGTAGGGACAAAGAAGAAGCTGGTATTCCACATAGGAGAAGCTCCACACGGCATTGAAACCACTTGGCTCATGCAAGAATATCGTATTTCTCCATCCTCTTCTACTGACATTTTTGCTATTAGCAATAGAGTTAGAAGAAAACACGATCATGATGAGAGTTGGAGCAAATGGGTTTTGTGCAGAGTGTATGAAAAGAAGATGTCCGTACGAGGTATAAACTACTCTAGTGATGATGACGGCGAAGATTACGACGACAGTGGGACAGAGCTATCTTGGCTTGACGAAGTTTATCTCTCTTTGGATGATGATCTTCAAGAAATAAGCATCTCCATTTTAGATTGA 681 0.3965 MKFMIYIPSDDERVKQLPPGFLFSPTDEELVLHFLYSKEASLLPCHPNIIPDLDLSLSDPFQLNGKALSSGNQYYFFSKVKEKRETENGYWKEIGESEEAIMSSSAAAVEKKVVGTKKKLVFHIGEAPHGIETTWLMQEYRISPSSSTDIFAISNRVRRKHDHDESWSKWVLCRVYEKKMSVRGINYSSDDDGEDYDDSGTELSWLDEVYLSLDDDLQEISISILD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90724g00012 226 ProSiteProfiles NAC domain profile. 17 178 IPR003441 GO:0003677|GO:0006355
Stsc90724g00012 226 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Stsc90724g00012 226 SUPERFAMILY NAC domain 14 178 IPR036093 GO:0003677|GO:0006355
Stsc90724g00012 226 Gene3D NAC domain 26 182 IPR036093 GO:0003677|GO:0006355
Stsc90724g00012 226 PANTHER NAC TRANSCRIPTION FACTOR 56 17 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90724g00012 Stsc-Chr90724 80361 83066 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90724g00012 17 186 NAC Transcription Factor Family AT1G69490 38.202 6.07e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc90724g00012 NAM 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90724g00012 - - adu:107470472 307.375