Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90723g00007 ATGCGTTGGTCATCGTTCTACCACACAGCATCAAGGGTTTTTAATGAGTATCCCAGTTTCTCCAAGTCTGTTATTGTATGCACTGTTATCAGTGGTGGAGGCCTAGTGGCATATGCAGAAGCAGTGCAAAGTAGTGAGAATGTGAAAGAAGAAGCAGAAAGAAAGAAGAAAGTGGTGATTCTTGGAACAGGTTGGGCTGGAACCAGTTTCATTAAGAGCATGAAAAACACTTCTTATGACATCCACGTAGTTTCACCGCGTAACTATTTTGCATTCACACCACTCTTGCCCAGTGTCACCTGTGGCACTGTTGAAGCACGCAGCATTGTTGAACCCATTCGCAACATCTCTAGAAAGAGTGGTGTGAATATTGAATTCAGTGAAGCAGAATGCTATAAGATCGACCCCAAGAACAGGAAAGTTTATTGCCGTGCTGATCCAGACAAAAAGATGGGTGGCATTGAAGACTTTTCCCTTGATTATGATTACTTGGTAATAGCTATGGGTGCAAAATCTAATACCTTCAACACACCTGGAGTTCAGGAAAATGCTTTCTTCTTGAAGGAAGTGGATGATGCTCTAAGAATCCGGCAAAAGGTGGTTGATCTTTTTGAGAAAGCAAGCATTCCATCCACACCTGTTGAAGAGAAGAAGAAGCTTCTAAGCTTTGTCATTGTTGGTGGAGGTCCAACTGGTGTTGAGTTTGCTGCAGAACTTCATGACTTTGTTCATGAGGATCTTTCTAAGCTATATCCTTCTCTGAAAAATTATGTCAAGATCACTCTGCTTGAGGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATCACAGAATTTGCTGAAACAAAGTTCAAAAGGGATGGCATTGATGTGAAGTTGGGATCTATGGTGATCAAAGTAAGTGAGAGAGAAATCTTTGCCAAAGATAGAGTAACAGGTAAAGTTGGTTCCATACCTCATGGAATGGTAGTTTGGTCGACAGGTGTCGGTCCACGCCCAGAAATAGTTGAATTCATGAAACAAGTTGGCCAGAGTAATAGACGTGCATTAGCCACTGATGAATGGCTAAGGGTGGAAGGATCTGATAACATCTATGCTTTAGGTGATTGTGCCACTATAAATCAGAGGAAAGTTATGGAAGATATAGCATCGATATTCAGCAAGGCAGACAAGAACAACACAGGAAAGTTAGATGTGAAAGAATTTCAAGGCGTTGTGGACGACATAATCGAAAGGTACCCTCAGGTGGAGATTTACTTAAAGAAGAACCAGATGAAAGATATAGCCACCTTGCTCAAGTTTTCTCAAGAGAGCTCAGTAACAGTTGACATTGAATCCTTCAAATCTGCACTTTCCAATGTTGATACTCAGATGAAAAATCTCCCTCCAACAGCTCAGGTAGCTGCTCAGCAAGGAGCCTATCTTGCAGATTGTTTCAACCGCATGGAGATTTGCGAGAAGTATCCAGAAGGCCCTCTGCGATTCAGGGGAACCGGGCGCCATCGCTTTCATCCCTTCAGGTACAAGCATTTTGGACAATTTGCTCCTCTAGGAGGAGAACAAACTGCAGCTCAACTTCCGGGAGATTGGATTTCAATTGGCCATAGCACTCAATGGTTGTGGTATTCTATATATGCAAGGTAA 1647 0.4238 MRWSSFYHTASRVFNEYPSFSKSVIVCTVISGGGLVAYAEAVQSSENVKEEAERKKKVVILGTGWAGTSFIKSMKNTSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNISRKSGVNIEFSEAECYKIDPKNRKVYCRADPDKKMGGIEDFSLDYDYLVIAMGAKSNTFNTPGVQENAFFLKEVDDALRIRQKVVDLFEKASIPSTPVEEKKKLLSFVIVGGGPTGVEFAAELHDFVHEDLSKLYPSLKNYVKITLLEAGDHILNMFDKRITEFAETKFKRDGIDVKLGSMVIKVSEREIFAKDRVTGKVGSIPHGMVVWSTGVGPRPEIVEFMKQVGQSNRRALATDEWLRVEGSDNIYALGDCATINQRKVMEDIASIFSKADKNNTGKLDVKEFQGVVDDIIERYPQVEIYLKKNQMKDIATLLKFSQESSVTVDIESFKSALSNVDTQMKNLPPTAQVAAQQGAYLADCFNRMEICEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSIYAR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90723g00007 548 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 380 IPR023753 GO:0016491
Stsc90723g00007 548 Gene3D - 45 430 - -
Stsc90723g00007 548 Gene3D - 442 548 - -
Stsc90723g00007 548 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 46 407 - -
Stsc90723g00007 548 SUPERFAMILY FAD/NAD(P)-binding domain 55 274 IPR036188 -
Stsc90723g00007 548 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Stsc90723g00007 548 PANTHER NADH DEHYDROGENASE 47 547 IPR045024 GO:0003954|GO:0006116
Stsc90723g00007 548 Coils Coil 35 55 - -
Stsc90723g00007 548 SUPERFAMILY EF-hand 336 462 IPR011992 -
Stsc90723g00007 548 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Stsc90723g00007 548 SUPERFAMILY FAD/NAD(P)-binding domain 223 375 IPR036188 -
Stsc90723g00007 548 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Stsc90723g00007 548 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Stsc90723g00007 548 PRINTS FAD-dependent pyridine nucleotide reductase signature 222 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90723g00007 Stsc-Chr90723 80239 83000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90723g00007 1 547 Chloroplast and Mitochondria Gene Families AT4G21490 67.631 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90723g00007 K03885 - gmx:100820044 912.524