Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90721g00019 ATGGCTATAGTATCCCAATCCCAAACAGAGTTACCATTAAATGAGAATGATTCTCAGGACATGGTTATATTCCAAGTCCTAAACGAGGCCAGTAATAATAATCATGAAGCGTCATCGTTCACGGTGATGAGTAATGGTGGCAGCAGGGGAGAGCAGCAGAGGCGTGGCATAGAAGCAAAGAGGATTATAGAGAAGAAGCACTACAGAGGAGTAAGGAGGAGGCCATGGGGGAAGTATGCAGCGGAGATAAGAGACTCGGCGAGACAGGGAGCAAGGATATGGCTAGGGACGTTCCAAACAGCGGAAGAAGCAGCCATGGCTTATGATAAAGCTGCTTTCAAGATGAGAGGCTCCAAGGCCTTGTTGAACTTCCCTGCTGAGGTTGTTGCTGCTGCTGCTGCTTCTTCCACTACTAATAATAATACCACCACCACCTAG 438 0.4772 MAIVSQSQTELPLNENDSQDMVIFQVLNEASNNNHEASSFTVMSNGGSRGEQQRRGIEAKRIIEKKHYRGVRRRPWGKYAAEIRDSARQGARIWLGTFQTAEEAAMAYDKAAFKMRGSKALLNFPAEVVAAAAASSTTNNNTTTT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90721g00019 145 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
Stsc90721g00019 145 SUPERFAMILY DNA-binding domain 67 127 IPR016177 GO:0003677
Stsc90721g00019 145 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Stsc90721g00019 145 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Stsc90721g00019 145 FunFam Ethylene-responsive transcription factor 2 66 127 - -
Stsc90721g00019 145 Gene3D AP2/ERF domain 66 127 IPR036955 GO:0003700|GO:0006355
Stsc90721g00019 145 CDD AP2 66 126 IPR001471 GO:0003700|GO:0006355
Stsc90721g00019 145 PANTHER DNA-BINDING DOMAIN 28 131 IPR044808 GO:0003700|GO:0009873
Stsc90721g00019 145 ProSiteProfiles AP2/ERF domain profile. 67 125 IPR001471 GO:0003700|GO:0006355
Stsc90721g00019 145 SMART rav1_2 67 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90721g00019 Stsc-Chr90721 111670 112107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90721g00019 2 128 AP2-EREBP Transcription Factor Family AT5G47220 46.763 1.14e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc90721g00019 AP2 3.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90721g00019 K13433 - zju:107411165 153.68