Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90721g00006 ATGGAAGAAGAAGCTGCTTCAAACCCCATCAAAATCTCCAACCGCACTCTCGTCTTCCCTTCTCACACTCCCTTCCACCAACACCACGCCCTTCCTCTCTCCCCCCTCGACAACGATCCCAACCTCCGCCTCACCTTCCGCTACCTCCGCGTCTACATTAACTCCCCCTCCGACCCCTATGACGTCATCTTCTCCTCCATCTCCAAAGCTCTTATTCACTACTATCCATTCGCCGGCACGCTTCGCTACCATCCACAACACAACCGCCTCGAGAATTGGTGCTCCGCCGCTCAGGGAGTCCCCCTCATTCGCGCCACCGCCCCAGGCATCACCCTCGAATCGGTAAACTACCTGGACGACCCGGATTTTACCTTCGTTGAGAAGTTAGTGCCCGATCCGGAACCCGAGGAGGGAATGGAGCACCCCTGCATGCTCCAAATAACGGTGTTCGCGTGCGGTGGGTTCACGCTGGGTGGTGCCATGCACCACGCGCTCAACGACGGTATGGGCGGGAGCTTGTTCTTCAACGCGGTGGCCGAGTTGGCTCGCGGGTCGACTCGGATATCGGTTGAACCGGTTTGGAACCGTGATGTATTGTTGGGAGCGAGGAACCCGCCCAAGGTGGAGTCAGCGTTGATAGGTGAGTTTCTGAGATTGGAGAAGGGGTTCTTGCCGTACCAAGATGACGCCGGTGATTTTGTGAGGGAGTGCTTCCACATTGAAGATGAGTCCTTGGAAGTGTTCAAGACATCATTGTTCGAACAATCTGGTCTCAAATTCACCACTTTTGAGGCTCTTGCTGCTTACATTTGGAGGTCCAAGGTTAAGGCGACGGGAATGAAGAGTGATGAGAAGGTTAAGTTAGCATACTCGATTAACATAAGAAGATTGGTAAAGCCAGCACTGCCAGCAGGGTATTGGGGTAACGGTTGTGTTCCAATGTATGTTGAGGTGAGTGTGAAGGATTTAATAGAGCGACCCATTTGGGAAACCGCGCAGCTAATAAACAAGAGCAAAAGCCAGGTGAGTGATGAGTACGTTCGGTCATACATTGATTTTCAGGCACTGCATTATGGGGATGGGATCACTGCTGGGAAAGGGAATGGGATTACTGGGTTCACTGATTGGAGACACTTGGGCCACTCTTCTGTGGACTTTGGATGTGGAGGCCCAGTTACTGTTTTGCCACTTGGCAGGAATCTCCTTGGGAGTAATCACCCTTGTTACTTCTTGCCTTATTCAACTGCTACTGCCAATCATGCTAAGAAGAAGGGTTTCAAGGTTCTGGTTACTCTGCCTCAATCTGCTTTGCCTGATTTTAGAGAGGATATGCAAGTTTTTGTCCACTAG 1350 0.5163 MEEEAASNPIKISNRTLVFPSHTPFHQHHALPLSPLDNDPNLRLTFRYLRVYINSPSDPYDVIFSSISKALIHYYPFAGTLRYHPQHNRLENWCSAAQGVPLIRATAPGITLESVNYLDDPDFTFVEKLVPDPEPEEGMEHPCMLQITVFACGGFTLGGAMHHALNDGMGGSLFFNAVAELARGSTRISVEPVWNRDVLLGARNPPKVESALIGEFLRLEKGFLPYQDDAGDFVRECFHIEDESLEVFKTSLFEQSGLKFTTFEALAAYIWRSKVKATGMKSDEKVKLAYSINIRRLVKPALPAGYWGNGCVPMYVEVSVKDLIERPIWETAQLINKSKSQVSDEYVRSYIDFQALHYGDGITAGKGNGITGFTDWRHLGHSSVDFGCGGPVTVLPLGRNLLGSNHPCYFLPYSTATANHAKKKGFKVLVTLPQSALPDFREDMQVFVH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90721g00006 449 Pfam Transferase family 10 445 - -
Stsc90721g00006 449 Gene3D - 9 213 IPR023213 -
Stsc90721g00006 449 Gene3D - 225 443 IPR023213 -
Stsc90721g00006 449 PANTHER ACYL TRANSFERASE 4 12 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90721g00006 Stsc-Chr90721 46862 48685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90721g00006 62 398 Monolignol Biosynthesis Gene Families AT5G48930 28.940 3.89e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90721g00006 - - gmx:100817021 624.009