Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90720g00021 ATGGCTATGGAGAACTATTCGTACCCGCCATCTTATCCAGACTCAGGGGACTCTTCTCCCCGCTCAAGAGAGATCGACTTCGAGAACCCTCCTCCATGGGACGAGCAACAACCCCCGCCTAACTACAAGGCCAAGTTCATGTGCAGTTACGGCGGAAAGATCCAGCCCCGTTCACACGACAACCAACTCTCCTACGTCGCCGGCGAGACCAAGATCCTCGCCGTCGACCTCAACGTAAAGTTTAACGCCATGATCACCAAGCTCTCCGCACTCTGCGGCTGCGACCCCAAGGAACTCTCCTTCAAGTACCAGCTCCCTGGTGAGGATCTTGATGCTCTCATATCGGTCACTAATGATGACGACCTTGACCACATGATGCACGAATACGATCGACTCTATCGTGCTTCCGCTAGACCTGCCCGCATGCGATTATTCCTCTTCCAAGCCAACACTACTAACAGTAATAACAACCTTCCTAACTCTTCTGATAACCGTCTTGAACCGACCCAGCCCGACCCGATTAAACCGAATCCCAACGTGGATTATCTCTTTGGTCTTGAGAAGAATACTGCTCTTAATGTTGCTCCTCAGCAGCAACTGCAGCCACCTGCACCTCTGCCTGCGGCGGCTCCTATCCCGGTCAAGTTACATGATACGGCACCGGAGCCTGTTCCACCGCCGCCGGAGTACCAACAGAGAGTCGCCGTTGGATCGGATCCGAACGTGAACCACCCGCTGGAGGTTCAGAGGCAGTTTCAGAGGATGCAAATTTCGGAAAGCGAGCAAGCTGCTGCGTATCGGAGGAAGAGCGAAGAAGGTCTCGCCGGGAATTATGCCCCTGCTGCCGGCGGTGACTATTACGCTCAGAAAGCTCCTCCGGCGTCTAATTTTCCGGCGAGTGCGCCGTTACAGCCTGGATATTGGCCTGAGAAGCATGTTTCCGGCGAGGCTTATCATCCGGCGGTGTCGTCGGCTGCCGGAGGTGGTGAACCATCGGTTTATGTGATTCCGGCGCATGGAGCGTTCTATCATCACTCGCCTGTGGTTCGTCCACAGACTCCCCCACCGACATCGCAGGGATACTACGCGGTGCAGCGAATGACTTCCGATGGTTACCGCGAAGCTCCGGTATACGGCGGCGTTCCGCCACATAAACCGCCGTTTTCTTCGGCTGCTCCGGCGAACCTGGCACAGGCTCAGCCGGTTAAAGGTCCAGCTTATACAGACGGATTCGGGGTAGTTAGGCCAGTTGGATTGCAGGATAACACCGGGGCGGCGTACGCACAGGTGGCGTNNNNNNNNNNGGGAGGTGGTGTGGTGCACGCTCCGCCGTACCAAGGAGTTACTCAGGCGGTAACCGGTGATATGAGAGCGGGTGGGGTGTCGTTGGGTCAAGATGAAACGGCGTCTACATCTGCAAATTAA 1425 0.5551 MAMENYSYPPSYPDSGDSSPRSREIDFENPPPWDEQQPPPNYKAKFMCSYGGKIQPRSHDNQLSYVAGETKILAVDLNVKFNAMITKLSALCGCDPKELSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFLFQANTTNSNNNLPNSSDNRLEPTQPDPIKPNPNVDYLFGLEKNTALNVAPQQQLQPPAPLPAAAPIPVKLHDTAPEPVPPPPEYQQRVAVGSDPNVNHPLEVQRQFQRMQISESEQAAAYRRKSEEGLAGNYAPAAGGDYYAQKAPPASNFPASAPLQPGYWPEKHVSGEAYHPAVSSAAGGGEPSVYVIPAHGAFYHHSPVVRPQTPPPTSQGYYAVQRMTSDGYREAPVYGGVPPHKPPFSSAAPANLAQAQPVKGPAYTDGFGVVRPVGLQDNTGAAYAQVAXXXXGGGVVHAPPYQGVTQAVTGDMRAGGVSLGQDETASTSAN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90720g00021 474 MobiDBLite consensus disorder prediction 373 392 - -
Stsc90720g00021 474 MobiDBLite consensus disorder prediction 151 168 - -
Stsc90720g00021 474 PANTHER OS05G0427100 PROTEIN-RELATED 12 337 - -
Stsc90720g00021 474 CDD PB1_UP2 47 147 - -
Stsc90720g00021 474 MobiDBLite consensus disorder prediction 1 43 - -
Stsc90720g00021 474 Pfam PB1 domain 59 148 IPR000270 GO:0005515
Stsc90720g00021 474 SUPERFAMILY CAD & PB1 domains 59 154 - -
Stsc90720g00021 474 SMART PB1_new 58 149 IPR000270 GO:0005515
Stsc90720g00021 474 Gene3D - 64 149 - -
Stsc90720g00021 474 MobiDBLite consensus disorder prediction 216 243 - -
Stsc90720g00021 474 MobiDBLite consensus disorder prediction 151 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90720g00021 Stsc-Chr90720 105583 108479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90720g00021 43 158 MAP Kinase Kinase Kinase AT3G46920 42.735 1.79e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90720g00021 - - adu:107480527 494.967