Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90718g00022 ATGGCTGAAATTGAAGGATCTCCGGGAAGCTCCATGCATGGAGTGACCGGAAGAGAACAAACCTTCATATCCTCAGTGTCATCTCCAATGGTTCCCACCGACACGACGGCGAACTTCGCCTTGCCGGTGGATTCAGAGCACAAGGCCAAAGTCTTCAAGCTCTTCTCCTTAGCAAACCCTCACATGAGAACCTTCCACTTGTCCTGGATCTCATTCTTTACTTGCTTCGTCTCCACCTTCGCCGCCGCCCCTCTCGTCCCCATAATCCGGGACAACCTAAACCTAACGAAGGTAGACATCGGCAACGCCGGTGTCGCCTCCGTCTCCGGAAGCATATTTTCGAGGCTGACAATGGGAGCCGTATGCGACCTCTTGGGGCCGCGATACGGCTGCGCATTCCTTATCATGTTAACCGCACCGACAGTATTCTGCATGTCGTTTGTCAATGACGCTGCAGGATACATAGCGGTGCGGTTCATGATAGGGTTTTCTCTGGCGACATTCGTGTCGTGCCAGTATTGGATGAGCACAATGTTTAATAGCAAGATCATAGGGCTTGTGAATGGAACGGCGGCGGGGTGGGGGAACATGGGTGGAGGAGCCACTCAGTTGATAATGCCGTTGGTTTATGAGGTGATTAGGAGAGCAGGGTCAACGCCATTCACTGCATGGAGGATTGCTTTCTTCATACCTGGTTTCTTGCATGTTATCATGGGGATCTTGGTGTTAACACTAGGACAAGATTTGCCTGATGGTAACCTTGGTGCCTTGCAAAAGAAGGGGAATGTTAATAAAGATAAATTCTCCAAGGTGTTGTGGTATGCCATAACCAATTACAGGACATGGATCTTTGCCCTTCTCTATGGTTACTCCATGGGAGTTGAACTTACCACTGACAACGTTATTGCTGAGTATTTCTATGACAGGTTTAATCTGAAGCTACACACAGCAGGAATCATTGCAGCAACGTTTGGAATGGCAAACATAGTAGCTCGTCCATTTGGTGGATACACATCAGATCTTGCAGCAAGATTGTTCGGCATGAGAGGCAGGCTATGGACCCTATGGATCCTCCAAACCCTTGGTGGTGTCTTCTGCATATGGCTTGGCCGTGCCAACTCTCTCCCTATAGCTATCTTAGCCATGATCCTCTTCTCCGTGGGAGCACAAGCCGCATGCGGCGCCACCTTCGGCATCATCCCCTTCATCTCAAGAAGATCCCTTGGAATCATCTCTGGTCTAACCGGAGCCGGTGGCAACTTCGGCTCCGGTTTGACTCAGCTGGTTTTCTTCTCCACCAACCGGTTCTCGACGTCGGCGGGGCTGTCGTTGATGGGGGCTATGATTGTGGCGTGCACTTTGCCGGTGACTCTGGTTCATTTTCCTCAGTGGGGTAGCATGTTTCTTCCTCCTTCAAAAGATGTGCAGAAAAGCACCGAAGAATATTATTACACTTCTGAGTGGAATGAAGAAGAGAAGCAGAAGGGTTTGCATCAGGGAAGTCTTAAGTTTGCTGAGAATAGCAAATCAGAGAGAGGAAAGCGTGTTGCATCTGCACCAACTCCGCCCAACACTACCCCTACCCATGACAATAATAATGTCTGA 1605 0.4972 MAEIEGSPGSSMHGVTGREQTFISSVSSPMVPTDTTANFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVNDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLVYEVIRRAGSTPFTAWRIAFFIPGFLHVIMGILVLTLGQDLPDGNLGALQKKGNVNKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAATFGMANIVARPFGGYTSDLAARLFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAILAMILFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTNRFSTSAGLSLMGAMIVACTLPVTLVHFPQWGSMFLPPSKDVQKSTEEYYYTSEWNEEEKQKGLHQGSLKFAENSKSERGKRVASAPTPPNTTPTHDNNNV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90718g00022 534 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 516 IPR044772 GO:0015112
Stsc90718g00022 534 FunFam Nitrate transporter 2.1 265 466 - -
Stsc90718g00022 534 FunFam High affinity nitrate transporter 57 254 - -
Stsc90718g00022 534 SUPERFAMILY MFS general substrate transporter 59 460 IPR036259 -
Stsc90718g00022 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Stsc90718g00022 534 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Stsc90718g00022 534 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Stsc90718g00022 534 MobiDBLite consensus disorder prediction 490 534 - -
Stsc90718g00022 534 MobiDBLite consensus disorder prediction 490 513 - -
Stsc90718g00022 534 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Stsc90718g00022 534 MobiDBLite consensus disorder prediction 519 534 - -
Stsc90718g00022 534 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90718g00022 Stsc-Chr90718 110004 112868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90718g00022 1 529 Inorganic Solute Cotransporters AT5G60770 80.340 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90718g00022 K02575 - gmx:100807710 1003.43