Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90718g00010 ATGGATGACAATGACCGAAAACTTTGCCAGCTAACTACAAAGATAAAATCATATTTGCGTCTTTCATCTACTCACTCTCACAACTCTCATCATACCACCACCACCACCACCATGCTCCGATCCGGCTACGGCAGCGACGGAATATATAGGTCCTTGAGACCTTCCTTTTCCCTCCCCAAAACCACCACCTCCCTCACCTCCTTCCTCTTCCAAACCACCTCCTCCTTCGCTTCCAAAACTGCCCTCATCGACGCCGACACCTCCGAAACCCTCACCTTCCGCCAACTCAAAACCACCGTTGCCAAGCTCTCCCACGCCCTCCTCCGCCTCGGCCTAAAAAAACACGACGTCATACTCATCTTCGCCCCGAACTCCATCCACTTCCCGATCTTCTTCCTCGCCGCCACCGCCATCGGCGCCGTCGTCACCACCGCCAATCCACTCTACACCGTGACCGAGCTCTCCAAACAAATCAGCAACTCCAACCCGAAGCTCGCCGTCACGGTTCCAGAGCTACACGAGAAACTCAGATCCTTCAAGTTCAAATTCCCCGCAATCTTAATCGGATCCGAAACGACACCAGAAACAATCAGTTATAGTCGTTTAATAGAACAATTCTCACAGTCAACAATCGAAAACTTACCAGTAAACGACGTGAACCAACACGATACGGCAGCGCTTCTGTATTCCTCTGGAACGACGGGAGTGAGCAAGGGCGTGATACTCACGCACGGGAACTTCATCGCGGCGGCGTTGATGATCGCAATGGACGACGATTACGCGGACGAGATCGACGGAGTAAACGACGGTGTATACATGTGCGTTTTGCCAATGTTCCACGTGTTCGGTTTGGCGGTTATTCTGTACTCGCAGCTAACGAGAGGGAGCACTGTAATTTCAATGAGGAGATTCGAGTTAGAGAAGTTTCTAGAAGGAATTCAGAATTACAAGGTAACGAACCTGTGGGTTGTGCCTCCGATTATTCTTGCGATGGCGAAGCAGAGTGTGGTGGATAAGTATGACGTGTCATCTTTGAGAAGGATTGGTTCCGGTGCTGCTCCACTTGGGAAGGAGTTGATGCAAGATTGTGCGAAGCGGTTTCCTCATGCTACTCTGATTCAGGGGTATGGCATGACTGAAACTTGTGGGATTATCTCTGTGGAGAATCCTAGAGCAGGGGTTCGTCATAGCGGTTCAACCGGAATGCTGGTTTCAGGAGTGGAAGCTCGAATTGTGAGTGTTGATAATCACAAGGCTCTCCCTCCTAAAGAATTGGGTGAGATTTGGGTACGGGGTCCAAATATGATGAAAGGTTATTTTAAGAATCCAGAGGCTACAAGATCAACTATAGATGAGAATGGGTGGGTCCATACTGGAGATCTTGGATATTTTGATGAGGAGGGTCAACTTTATGTTGTTGACCGTCTCAAAGAACTCATCAAGTATAAAGGCCTTCAGGTTGCACCAGCAGAACTTGAAGGGCTTCTAGTTTCTCACCCTGAAATTCTAGATGCTGTTGTCATCCCATATCCGGATGATGAGGCTGGGGAGGTTCCAATTGCCTTTGTTGTTCGTTCACCCAACACTTCACTCACTGAACAAGATGTTCAGAAGTTTATTGCTAATCAGGTTGCACCATACAAAAGATTACGAAGAGTGACATTCATCAACAGTGTTCCAAAGACAGCTTCAGGAAAGATACTCAGAAGAGACCTCATAGCAAAAGTACGATCCAATTCCAAATTATGA 1749 0.4808 MDDNDRKLCQLTTKIKSYLRLSSTHSHNSHHTTTTTTMLRSGYGSDGIYRSLRPSFSLPKTTTSLTSFLFQTTSSFASKTALIDADTSETLTFRQLKTTVAKLSHALLRLGLKKHDVILIFAPNSIHFPIFFLAATAIGAVVTTANPLYTVTELSKQISNSNPKLAVTVPELHEKLRSFKFKFPAILIGSETTPETISYSRLIEQFSQSTIENLPVNDVNQHDTAALLYSSGTTGVSKGVILTHGNFIAAALMIAMDDDYADEIDGVNDGVYMCVLPMFHVFGLAVILYSQLTRGSTVISMRRFELEKFLEGIQNYKVTNLWVVPPIILAMAKQSVVDKYDVSSLRRIGSGAAPLGKELMQDCAKRFPHATLIQGYGMTETCGIISVENPRAGVRHSGSTGMLVSGVEARIVSVDNHKALPPKELGEIWVRGPNMMKGYFKNPEATRSTIDENGWVHTGDLGYFDEEGQLYVVDRLKELIKYKGLQVAPAELEGLLVSHPEILDAVVIPYPDDEAGEVPIAFVVRSPNTSLTEQDVQKFIANQVAPYKRLRRVTFINSVPKTASGKILRRDLIAKVRSNSKL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90718g00010 582 Gene3D - 478 580 IPR045851 -
Stsc90718g00010 582 Pfam AMP-binding enzyme C-terminal domain 491 566 IPR025110 -
Stsc90718g00010 582 FunFam Long-chain-fatty-acid--CoA ligase FadD 50 477 - -
Stsc90718g00010 582 CDD 4CL 64 572 - -
Stsc90718g00010 582 Gene3D - 46 477 IPR042099 -
Stsc90718g00010 582 Pfam AMP-binding enzyme 74 482 IPR000873 -
Stsc90718g00010 582 SUPERFAMILY Acetyl-CoA synthetase-like 49 576 - -
Stsc90718g00010 582 FunFam 4-coumarate--CoA ligase 2 478 579 - -
Stsc90718g00010 582 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Stsc90718g00010 582 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 46 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90718g00010 Stsc-Chr90718 51255 54007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90718g00010 38 578 Monolignol Biosynthesis Gene Families AT4G05160 64.000 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90718g00010 K01904 - gmx:100808944 723.776