Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90716g00024 ATGGAGGAGATGTCGACTACGGTTGCAGTGCCATTAACAGTAGGTAATTCGGCGTGTGATAAGCCAACCATAGTAGCTACCCACATGGATGTATCTAGACTTAAGCTGATGACAGATACGGGGTTGTTAAGTAATTCCGTAACAACGGTTTCTACTGAAACATTTATAGGCTCTGATGAGGATCATAACCGTGGCAATCTTGAGGATGAAGTTGGTAGTACAACAGTCACACCATCAAAAAGGGGAAGTGAAGGAGAAATTCCTTTGGATGATATGATATCCCAGAATAAAAGCACTTTGGTTGGTGGTGATGAAGCTTCAACCCCAGAAATCGAGGAGGATGATACCTTATCATTGGAAGGTGATCCAATTATTGATAGCTCCTGTTCTCTTTCAGCAGCCAGTGAGAACAGTAGTATTTGTGGAGATGAGTTTGTCAATTCGGAGGCTAATCCGGATTTAGTAACAAGAAGTTCCATAGACATAGGGAAGAGCATATGTGCTGTTGATGCTGTTGCCAGGGCTGCTGATTTAGGGGAGTCAAATTTTGAGGCAGATATTATGAGTGAACCCCTTGCTGTAGCAGTGAGCCTTGAAGAAGAGGCAGTAGTTGGATCTGTCACAAAGCCTACTGCAGTTGTTCTTCATCAGCTACCTCTAGAAAAAGCCGTGGCTGGGACAGGTTGTCGAAGTGTTTTTGAGTTGGATTGTACACCACTCTGGGGAGTTATATCTATGTGTGGAAAAAGACCTGAGATGGAAGATGCATATCAAACGATGCCCCGATTTATGAAGATTCCTATTGAAATGCTAATTGGTGATAGGGTAATTGATGGACTGAATAAAAGTTTGAGTCAGCAAACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAACTATTGTCGTGAGCGTATGCATTTGGCCTTGGCTGAGGAAATAGAATTAGTCAAGGAAGGTCTAATAGTTGGAAGTACCAAGGATGATTGTCAAGACCAATGGAGAAAAGCTTTCACCAACTGCTTTTTGAAGGTTGATGCTGAAGTTGGGGGAAAAGTTAATAATGAACCTGTTGCTCCAGAGACTGTCGGATCAACTGCAGTTGTTGCTGCTATCTGTTCATCTCATATCATCATTTCAAACTGTGGCGATTCAAGAGCAGTTTTGTGCCGTGGCAAAGAGCCCATGGCCTTATCTGTTGATCATAAACCCAACCGAGACGATGAATATGCAAGAATTGAGGCAGCAGGAGGGAAGGTGATCCAGTGGAATGGTCACCGTGTATTTGGTGTCCTTGCAATGTCACGGTCTATCGGTGATAGATATTTGAAGCCATGGATCATTCCGGAGCCGGAAGTAACGTTTCTTCCCCGGACGAAAGACGACGAATGCCTCATCCTGGCCAGTGATGGCCTGTGGGATGTGATGACGAACGAAGAGGCATGCGACCTAGCTCGGAGGCGAATACTTCTCTGGCACAAGAAAAATGGCCTCACACTGCCACCAGAAAGGGGAGAGGAAGCTGACCCGGCAGCACAAGCAGCCGCAGAGTACCTGTCGAGCCGCGCCTTACAGAAAGGAAGCAAAGATAACATCACAGTGATTGTGGTGGACTTAAAAGCTCAAAGAAAATTCAAGAACAAGACATGA 1665 0.4498 MEEMSTTVAVPLTVGNSACDKPTIVATHMDVSRLKLMTDTGLLSNSVTTVSTETFIGSDEDHNRGNLEDEVGSTTVTPSKRGSEGEIPLDDMISQNKSTLVGGDEASTPEIEEDDTLSLEGDPIIDSSCSLSAASENSSICGDEFVNSEANPDLVTRSSIDIGKSICAVDAVARAADLGESNFEADIMSEPLAVAVSLEEEAVVGSVTKPTAVVLHQLPLEKAVAGTGCRSVFELDCTPLWGVISMCGKRPEMEDAYQTMPRFMKIPIEMLIGDRVIDGLNKSLSQQTIHFFGVYDGHGGSQVANYCRERMHLALAEEIELVKEGLIVGSTKDDCQDQWRKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAAICSSHIIISNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRTKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGLTLPPERGEEADPAAQAAAEYLSSRALQKGSKDNITVIVVDLKAQRKFKNKT 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90716g00024 554 ProSitePatterns PPM-type phosphatase domain signature. 291 299 IPR000222 GO:0043169
Stsc90716g00024 554 FunFam Protein phosphatase 2C 16 228 554 - -
Stsc90716g00024 554 MobiDBLite consensus disorder prediction 56 116 - -
Stsc90716g00024 554 CDD PP2Cc 242 544 IPR001932 -
Stsc90716g00024 554 SMART PP2C_4 230 542 IPR001932 -
Stsc90716g00024 554 SUPERFAMILY PP2C-like 234 545 IPR036457 -
Stsc90716g00024 554 Gene3D - 227 554 IPR036457 -
Stsc90716g00024 554 ProSiteProfiles PPM-type phosphatase domain profile. 240 544 IPR001932 -
Stsc90716g00024 554 PANTHER PROTEIN PHOSPHATASE 173 544 IPR015655 GO:0004722|GO:0006470
Stsc90716g00024 554 Pfam Protein phosphatase 2C 273 537 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90716g00024 Stsc-Chr90716 94045 98574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90716g00024 1 554 PP2C-type Phosphatase Gene Family AT1G17550 49.117 1.58e-168 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90716g00024 K14497 - gmx:100803321 844.343