Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90716g00018 ATGAGTGATAAGAATCCAAAAGCAGCAGATTCACCGCCTGATAGCAACCAGTGGTTCCATGAACTCTCTGACTACTTGAAGCTCAATGATGATGATGATGATCAATGGCCACCAGATGATGATAATCTTCCACCACCACCACCACACCCATCATTATTTGTTCCCAATACTGGTGATTTTGGAGCAAGTGGCAGTGGTGGCAGCGCCACCCTCCTTCGGGGGTCTTCTGAAGAGATTAGTGGAAGCGAGAACAAAAACATTATTAGAGAAAGAGTTGCATTTAAAACGAAGTCAGAGGTTGAGATACTGGACGACGGTTTCAGGTGGCGGAAGTACGGAAAGAAAATGGTTAAGAACAGCCCAAATCCAAGGAACTACTATAGGTGTACAGTGGATGGATGTCCGGTTAAGAAGAGAGTTGAGAGAGACAGGGATGATCCAACTTATGTAATTACAACCTATGAAGGCAACCATACTCACCCAGCTTCTTACTAG 495 0.4465 MSDKNPKAADSPPDSNQWFHELSDYLKLNDDDDDQWPPDDDNLPPPPPHPSLFVPNTGDFGASGSGGSATLLRGSSEEISGSENKNIIRERVAFKTKSEVEILDDGFRWRKYGKKMVKNSPNPRNYYRCTVDGCPVKKRVERDRDDPTYVITTYEGNHTHPASY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90716g00018 164 MobiDBLite consensus disorder prediction 1 85 - -
Stsc90716g00018 164 SUPERFAMILY WRKY DNA-binding domain 96 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc90716g00018 164 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90716g00018 164 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 161 IPR044810 GO:0003700
Stsc90716g00018 164 MobiDBLite consensus disorder prediction 61 82 - -
Stsc90716g00018 164 FunFam WRKY transcription factor 57 89 163 - -
Stsc90716g00018 164 Coils Coil 164 164 - -
Stsc90716g00018 164 ProSiteProfiles WRKY domain profile. 98 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90716g00018 164 Gene3D WRKY domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc90716g00018 164 SMART WRKY_cls 103 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90716g00018 Stsc-Chr90716 79650 80589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90716g00018 91 162 WRKY Transcription Factor Family AT5G26170 83.333 4.43e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc90716g00018 WRKY 3.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90716g00018 - - gmx:100819462 162.155