Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90716g00018 | ATGAGTGATAAGAATCCAAAAGCAGCAGATTCACCGCCTGATAGCAACCAGTGGTTCCATGAACTCTCTGACTACTTGAAGCTCAATGATGATGATGATGATCAATGGCCACCAGATGATGATAATCTTCCACCACCACCACCACACCCATCATTATTTGTTCCCAATACTGGTGATTTTGGAGCAAGTGGCAGTGGTGGCAGCGCCACCCTCCTTCGGGGGTCTTCTGAAGAGATTAGTGGAAGCGAGAACAAAAACATTATTAGAGAAAGAGTTGCATTTAAAACGAAGTCAGAGGTTGAGATACTGGACGACGGTTTCAGGTGGCGGAAGTACGGAAAGAAAATGGTTAAGAACAGCCCAAATCCAAGGAACTACTATAGGTGTACAGTGGATGGATGTCCGGTTAAGAAGAGAGTTGAGAGAGACAGGGATGATCCAACTTATGTAATTACAACCTATGAAGGCAACCATACTCACCCAGCTTCTTACTAG | 495 | 0.4465 | MSDKNPKAADSPPDSNQWFHELSDYLKLNDDDDDQWPPDDDNLPPPPPHPSLFVPNTGDFGASGSGGSATLLRGSSEEISGSENKNIIRERVAFKTKSEVEILDDGFRWRKYGKKMVKNSPNPRNYYRCTVDGCPVKKRVERDRDDPTYVITTYEGNHTHPASY | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90716g00018 | 164 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Stsc90716g00018 | 164 | SUPERFAMILY | WRKY DNA-binding domain | 96 | 162 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc90716g00018 | 164 | Pfam | WRKY DNA -binding domain | 104 | 161 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc90716g00018 | 164 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 42 | 161 | IPR044810 | GO:0003700 | |
Stsc90716g00018 | 164 | MobiDBLite | consensus disorder prediction | 61 | 82 | - | - | |
Stsc90716g00018 | 164 | FunFam | WRKY transcription factor 57 | 89 | 163 | - | - | |
Stsc90716g00018 | 164 | Coils | Coil | 164 | 164 | - | - | |
Stsc90716g00018 | 164 | ProSiteProfiles | WRKY domain profile. | 98 | 163 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc90716g00018 | 164 | Gene3D | WRKY domain | 90 | 156 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc90716g00018 | 164 | SMART | WRKY_cls | 103 | 162 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90716g00018 | Stsc-Chr90716 | 79650 | 80589 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90716g00018 | 91 | 162 | WRKY Transcription Factor Family | AT5G26170 | 83.333 | 4.43e-44 | 142 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc90716g00018 | WRKY | 3.4e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90716g00018 | - | - | gmx:100819462 | 162.155 |