Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90716g00017 ATGAGTGATAAGAATCCAAAAGCAGCAGATTCACCGCCTGATAGCAACCAGTGGTTCCATGAACTCTCTGACTACTTGAAGCTCAATGATGATGATGATGATCAATGGCCACCAGATGATGATAATCTTCCACCACCACCACCACACCCATCATTATTTGTTCCCAATACTGGTGATTTTGGAGCAAGTGGCAGTGGTGGCAGCGCCACCCTCCTTCGGGGGTCTTCTGAAGAGATTAGTGGAAGCGAGAACAAAAACATTATTAGAGAAAGAGTTGCATTTAAAACGAAGTCAGAGGTTGAGATACTGGACGACGGTTTCAGGTGGCGGAAGTACGGAAAGAAAATGGTTAAGAACAGCCCAAATCCAAGTGTATTGATGCAGGAACTACTATAG 396 0.447 MSDKNPKAADSPPDSNQWFHELSDYLKLNDDDDDQWPPDDDNLPPPPPHPSLFVPNTGDFGASGSGGSATLLRGSSEEISGSENKNIIRERVAFKTKSEVEILDDGFRWRKYGKKMVKNSPNPSVLMQELL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90716g00017 131 MobiDBLite consensus disorder prediction 61 82 - -
Stsc90716g00017 131 Gene3D WRKY domain 90 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc90716g00017 131 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 123 IPR044810 GO:0003700
Stsc90716g00017 131 ProSiteProfiles WRKY domain profile. 98 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90716g00017 131 Pfam WRKY DNA -binding domain 104 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90716g00017 131 SUPERFAMILY WRKY DNA-binding domain 96 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc90716g00017 131 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90716g00017 Stsc-Chr90716 79650 80589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90716g00017 91 123 WRKY Transcription Factor Family AT5G26170 87.879 2.13e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc90716g00017 WRKY 6.2e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90716g00017 - - gmx:100819462 93.2041