Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90716g00011 ATGAGTTTGAGTGCAGCAGCAGAGGAAGATTCTTCCTCCTCGGAGATTCACCTTCCGGCAGAGATAGACTGGCACATGCTCGACAAGTCAAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTCTCCGCCGCCCTCTACCCGATGGTCGTCCTCAAAACTCGCCAGCAAGTATCTTCATCACAGTACTCCTGCTTCAACATCTCCTCCGCCATTATCCGCTTCGAAGGTCTCAGAGGCTTCTACAAAGGCTTCGGAACTTCTCTCATGGGAACCATCCCAGCTCGAGCTCTTTACATGGCCGCACTCGAAGTCACCAAAAGCAATGTCGGAACCGGACTCGTCGAGTTGGGTTTCTCCGACACCACCGCCACCGCCGTCTCTAACGCCGCCGCAGGTGTCACTTCCGCCATGGCAGCTCAGCTCGTGTGGACCCCAATCGATGTGGTAAGCCAGAGACTCATGGTTCAAGGTTGCAGCCATAACCATAACAGCATGCTCAGAAATCTCAACTCTGAGAATTACAGAAACGGCATCGATGCTTTCAGGAAGATTCTGTGTGCTGATGGAGCCAGAGGATTCTACAGAGGATTCGGTATCTCGATCTTAACCTACGCACCTTCCAATGCAGTTTGGTGGACTTCATATTCAATGGTTCACAGATTGATTTGGAGTGCATTTGGTTGCTACATCTATGATAATAACAATTCTAGGCCTGATTCGAGGGCTATGGTGGGAGTTCAAGGTTTGAGTGCTGTTCTTGCCAGTGGGGTGTCTGCGATTGTCACAATGCCGCTTGACACGATCAAGACGAGGTTGCAGGTTTTGGATGCGGAGGAGAATGGAAGGAGGAGCCCGTTGACTTTTGGTCAAACGGTGAGGAACTTGGTTAAGGAAGGTGGGCTTTTAGCTTGTTACAGAGGGTTGGGTCCAAGGTGGGCTTCAATGTCTATGTCTGCTACAACCATGATCACTACCTACGAGTTCTTGAAACGCTTGTCTACTAAGTCTCAAGACAAATTTACTTGA 1032 0.5029 MSLSAAAEEDSSSSEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSSQYSCFNISSAIIRFEGLRGFYKGFGTSLMGTIPARALYMAALEVTKSNVGTGLVELGFSDTTATAVSNAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCSHNHNSMLRNLNSENYRNGIDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWSAFGCYIYDNNNSRPDSRAMVGVQGLSAVLASGVSAIVTMPLDTIKTRLQVLDAEENGRRSPLTFGQTVRNLVKEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRLSTKSQDKFT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90716g00011 343 Pfam Mitochondrial carrier protein 249 338 IPR018108 -
Stsc90716g00011 343 Pfam Mitochondrial carrier protein 41 110 IPR018108 -
Stsc90716g00011 343 Pfam Mitochondrial carrier protein 126 225 IPR018108 -
Stsc90716g00011 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
Stsc90716g00011 343 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 339 - -
Stsc90716g00011 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 334 IPR018108 -
Stsc90716g00011 343 Gene3D Mitochondrial carrier domain 31 342 IPR023395 -
Stsc90716g00011 343 SUPERFAMILY Mitochondrial carrier 25 331 IPR023395 -
Stsc90716g00011 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 223 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90716g00011 Stsc-Chr90716 57586 58617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90716g00011 1 340 Chloroplast and Mitochondria Gene Families AT5G26200 67.052 1.70e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90716g00011 K15121 - gmx:100784202 546.969