Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90714g00012 ATGTATTTATATTTATACAGATGGTCAAGAATTGCAAGGAAGTTGCCGGGACGTACAGACAATGAGATCAAGAACTTTTGGAGGACTCAAATGAGGAAGCAGAAGGCACAGCAGAAGAAGCATGCACCTGAAACCACCCAATCACCATCATCACCTTCCTCTACCAGTTACCAATCCTCTTCTAGTAACAAGGATGTTGGGGAAGAGAGCTTCTACGACACTGGAGGGCATAATGGTAATAACAGCAACAGCAATAACAGCACTGCTGCGATTATGAAAGAAGAAGGTTCCAAAAATGATGATGATGGAATAATTATCAATAGTAATAGTAATAATATTGATGTTGATGATTACTCCATGGACGATATATGGAATGATATCGCTGCTATGTCATCATCAGAAGAACACAACAACTTTATTTCTGCTGCTTCATCATCAACATCATGTTGGCATGATGACTACTATTATTCCTCAGAACCACTACCACCACTATGGATGATCATGGATGATCAAGAACAAGAACAAAGTAATCAAGTCTTATTCCTTTCTTCCATTGAACCACTCTTAACCACTTAA 576 0.3872 MYLYLYRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQQKKHAPETTQSPSSPSSTSYQSSSSNKDVGEESFYDTGGHNGNNSNSNNSTAAIMKEEGSKNDDDGIIINSNSNNIDVDDYSMDDIWNDIAAMSSSEEHNNFISAASSSTSCWHDDYYYSSEPLPPLWMIMDDQEQEQSNQVLFLSSIEPLLTT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90714g00012 191 MobiDBLite consensus disorder prediction 29 87 - -
Stsc90714g00012 191 CDD SANT 7 29 IPR001005 -
Stsc90714g00012 191 ProSiteProfiles Myb-like domain profile. 7 31 IPR001005 -
Stsc90714g00012 191 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 7 107 IPR044676 GO:0003700|GO:0006355|GO:0043565
Stsc90714g00012 191 Gene3D - 2 63 - -
Stsc90714g00012 191 Pfam Myb-like DNA-binding domain 7 29 IPR001005 -
Stsc90714g00012 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 35 IPR017930 -
Stsc90714g00012 191 MobiDBLite consensus disorder prediction 41 87 - -
Stsc90714g00012 191 SUPERFAMILY Homeodomain-like 6 37 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90714g00012 Stsc-Chr90714 83144 84101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90714g00012 7 127 MYB Transcription Factor Family AT3G46130 43.077 1.73e-17 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc90714g00012 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90714g00012 K09422 - gmx:100776886 98.2117