Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90714g00006 ATGTTAACGAGAGAGAGGCAGCATTTGATAATCCTTCCAGAAATGAGNNNNNNNNNNCCTCATCAATGGTTTCCTGATTCTGCTGAAGTGGATCTTTTTCCAAACAAGAAGCAAGCAGTAGAAGATGTAAATGGAAGATCAAGTTCAGGATTTTCAAATGTCAGTTATCCTCCTTGGGACAACAGCCCCGGTTTTACAGTATCAAATATTGTTGATCAGTTGTTTGGGTCTGAAACTAGGCAGGCCAATGTCATTGAAAAGAATGCTTATGTTCCTGCTGGTAGCTCTAATGTCAGAACAAGGTCAATGACTAATCAATATGGGGACAATTCTCCTATTGGCTTGTCTATCTCTCATTCAGTTGAAAATTCGGAAGCACGCCAAAATTACGGTGCAGCTAAAAAGGTTAAAGTAAGTCAGGTTAGGGATATTGATGGTGTACGACATCATCCTGACGGCCTTAATTACAATATGCAAAGCAATGGTGATCTACATCAGGCCTATGGCGGGGAGATTGACAAGGATGGTAATGTAACTTTAATGGGTCTTGCCTACAATGGAGGCGATGTTCATGTGAGATCTTCCGGTGCCTCCTATGCCAAAGGAGGCGACACGGGCATATCATTTGGTACTGATTCCTATAACAAAGATAACACAAATGTGATTCCATTTGATGGGTTCCCAGATGAACGGGGTATTATCACCACCGGCAGGCCTGCTGCAGACTACGGTCAACTATATAATGAATCTTCACTCCATATACCAGCAGCCGGTCATGAGCAAGAGTTGGATCCATCAAATTCTGGTGCTGTTGCAAATACTCCTCGAGTAGTAAAACAAAAGTCTGAAACTGTGTCCAAGAGTAAACAAGAGACCAAAGCAACCAAGAAAGAATCTCCAAACAGCTTCCCAACTAATGTCAGGAGCTTGATATCTACTGGTATCCTTGATGGTGTTCCTGTGAAGTATGTCTCAGCGGCCCGGGAGGAACTTCGTGGAATCATAAAAGGATCTGGCTATCTTTGTGGGTGTAAGAAATGCAACTACTCGAAGGCTCTGAATGCATATGAGTTTGAGAGACATGCTAATTGCAAATCAAAACATCCAAACAATCACATTTATTTTGATAATGGGAAAACCATTTATCAAATAGTACAGGAATTGAAGAGTACCCCTGAAAGTATGTTGTTTGATACAATTCAAACTGTTTTTGGCGCACCGATTAATCAGAAAGCATTTCGCTACTGGAAAGAATCATACCAAGCAGCAACGCGGGAGCTTCAGCGCATTTATGGAAAAGAATAA 1305 0.413 MLTRERQHLIILPEMXXXXPHQWFPDSAEVDLFPNKKQAVEDVNGRSSSGFSNVSYPPWDNSPGFTVSNIVDQLFGSETRQANVIEKNAYVPAGSSNVRTRSMTNQYGDNSPIGLSISHSVENSEARQNYGAAKKVKVSQVRDIDGVRHHPDGLNYNMQSNGDLHQAYGGEIDKDGNVTLMGLAYNGGDVHVRSSGASYAKGGDTGISFGTDSYNKDNTNVIPFDGFPDERGIITTGRPAADYGQLYNESSLHIPAAGHEQELDPSNSGAVANTPRVVKQKSETVSKSKQETKATKKESPNSFPTNVRSLISTGILDGVPVKYVSAAREELRGIIKGSGYLCGCKKCNYSKALNAYEFERHANCKSKHPNNHIYFDNGKTIYQIVQELKSTPESMLFDTIQTVFGAPINQKAFRYWKESYQAATRELQRIYGKE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90714g00006 434 PANTHER AUTOIMMUNE REGULATOR 19 414 - -
Stsc90714g00006 434 MobiDBLite consensus disorder prediction 266 281 - -
Stsc90714g00006 434 MobiDBLite consensus disorder prediction 255 305 - -
Stsc90714g00006 434 Pfam Tify domain binding domain 333 388 IPR032308 -
Stsc90714g00006 434 MobiDBLite consensus disorder prediction 282 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90714g00006 Stsc-Chr90714 27497 30763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90714g00006 285 421 PHD Transcription Factor Family AT3G53680 49.275 1.42e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90714g00006 - - gmx:100802229 585.104