Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90712g00004 ATGGCTTCCTCCTCTAGTTCCCACCTCAAAAACACCAGCAACTTTGTGGAGCAAGAAAAGGAACACCTTCACTCTCAAAGACATGGACAAAAAAAAGAGAAAGAGAAAGAGAAAGAAGAAGAAAATTGGCTCAAGTTAGGGTTGGGGCTAGGAAGAAGAAGTGACATCATCAACAATCATCATCATCATGGATCAAGAAATAATCCACAATTTTTATTATGTTCTTCTGATCCATCACCATCATCATCATCTCATATAGGAGGCAGCCATGGCGATGAACATCATCATGATCATCAAGAAATGGTGAAATTAGGGTTAGGGTTAGGGTTTCAACAAGATTCAAGGTTAGAACCGAAAGATAACAAGATGATGATGGTTGAATCTACTATTGGTTATGGCAATAGCTTATTATTGGGGTCACCTAAAGATCATTATAGCGATGATGATGATGATGGAAATGGCATGGTGAAATTATGGGTACCATCATCATGGAAAATTGATTCAAGTATGGTGGTGGATCCTTGTGGTGGTGGTGGTGATACTCATTATTACAAGTGTGGATTGTGGTTCACGCTACGTCCCTCTACCAACCGAGGAGGAGAAGCTTTGCCTCAGATACCAAAGGCGTACATTAGAGTCAGGGACGAAAACATGACGGTCTTCATGGTTAAAAAGTATCTGGTTAGAAAACTTGGTCTCTCCAATGAAGCTGAGGTTGATATCTCATGCATGGGTGAAAGCTTATCCCACATTCAAACATTGAAGCAAGTAAGAGATGCTGTTTGGATACCTAGATTGCTAGAATCTTTAGATTCAACAACTTTCTCACTTGGAGTTTCCAATCATAATAATTATTATGATTATGATGATGCCTCTTTACACTATATAATGTGTCTGCTTTACAGAAAACATTGCTTTTTGAATTAA 927 0.3862 MASSSSSHLKNTSNFVEQEKEHLHSQRHGQKKEKEKEKEEENWLKLGLGLGRRSDIINNHHHHGSRNNPQFLLCSSDPSPSSSSHIGGSHGDEHHHDHQEMVKLGLGLGFQQDSRLEPKDNKMMMVESTIGYGNSLLLGSPKDHYSDDDDDGNGMVKLWVPSSWKIDSSMVVDPCGGGGDTHYYKCGLWFTLRPSTNRGGEALPQIPKAYIRVRDENMTVFMVKKYLVRKLGLSNEAEVDISCMGESLSHIQTLKQVRDAVWIPRLLESLDSTTFSLGVSNHNNYYDYDDASLHYIMCLLYRKHCFLN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90712g00004 308 MobiDBLite consensus disorder prediction 63 87 - -
Stsc90712g00004 308 PANTHER RING FINGER PROTEIN 186 305 IPR044171 GO:0007275
Stsc90712g00004 308 MobiDBLite consensus disorder prediction 14 40 - -
Stsc90712g00004 308 Gene3D - 177 267 - -
Stsc90712g00004 308 MobiDBLite consensus disorder prediction 57 98 - -
Stsc90712g00004 308 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90712g00004 Stsc-Chr90712 49109 52262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90712g00004 203 259 C3H Transcription Factor Family AT3G23060 45.614 8.68e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90712g00004 - - adu:110274740 358.607