Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90710g00001 ATGTTTGAAGAGCAAGAGGTTGAAATCCCTACGCAGATAGGGTTAGTTCCTCCTTTCCCATTTGAGTGCCTTCAATTTTTCAATAATAAAGCTTTACTGCCTGCTATAGCTCCTCCTCCTCTGCCGCCGCCACCATCACCACATCTCATCGCTTCTTCTTGTTTGGTAGGAGCACCCCAACTCCTTTCATTCAACAGATCCACCGCAAATAGTAATAATTCATGGGCAAGGGGAGAGGTAACAGCAGGAGATTGCATGATGATGATGACGATGATGAGTAACAAAAGAAGCGGAGGAGATATTGCAGCGATGAAGATGAAAATGAAGAAGATGAAAGGGGGAAGTGGGAGAGGAAGAAGGAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATCTTCTTGATGATGGCTATAAATGGAGAAAGTATGGTCAGAAAGTTGTCAAGAACACACAACACCCCAG 476 0.4496 MFEEQEVEIPTQIGLVPPFPFECLQFFNNKALLPAIAPPPLPPPPSPHLIASSCLVGAPQLLSFNRSTANSNNSWARGEVTAGDCMMMMTMMSNKRSGGDIAAMKMKMKKMKGGSGRGRRKVREPRFCFKTMSDVDLLDDGYKWRKYGQKVVKNTQHP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90710g00001 158 Pfam WRKY DNA -binding domain 139 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90710g00001 158 Gene3D WRKY domain 125 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc90710g00001 158 SUPERFAMILY WRKY DNA-binding domain 130 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc90710g00001 158 ProSiteProfiles WRKY domain profile. 133 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90710g00001 158 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 158 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90710g00001 Stsc-Chr90710 575 1322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90710g00001 106 158 WRKY Transcription Factor Family AT4G39410 77.358 1.44e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc90710g00001 WRKY 6.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90710g00001 - - qsu:111991558 113.235