Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90709g00019 ATGGATGAAACCTCAGCCGCTGCTAATTGGATCGATGGAATATTGAAGGATCTAATCCACACCTCCAACACTGTCTCCATCCCTCAACTCATCAACAACGTTAGGGAGATTATTTACCCTTGCAACCCAAACTTAGCTATGCTCCTTGAGTACAGGCTCCGCCTCCTCACAACAACTGACTCCTCCTCCGCCTCCGCCGTCGCAGTCGCAGCCGCAACCGCATCAACACCGCCACTACCGCCTCCGCCAAACAAAACTCAGCTCATGAAGCAAACAAATTCTCCTCACATGCATGCTTACAGCACTATGCATTTTCAAGATTCTTCACCGGTGAGTCAATACTGGCCGGTAGTACCGCCACCGCCGTTAGATTCAAACAATAACAATTCAGTTTCATTAGCCAATACTTTACAATCTCCGCCACCTCCACCTCCGCCGCCGCCAACGCAGCAAGAAAAGCCACCTCAGGAAGAAGATCTGGTTCCAGCAACAACAACAGCAACCCCGCGAAACACCACCACCGCCACGGAAATGGCGATGCTAGCAAGAAAGAAAGCGGAGGAGGTGAATCAACAGAAGAAGAAAGACGAAGAAGGATTACACCTCCTCACGCTTCTCCTCCAGTGCGCGGAAGCGGTTTCAGCTGAGAATCTAGAAGATGCGAACAAGATGCTTCTAGAAATTTCTCAACTGTCTACTCCGTTCGGCACATCAGCGCAACGCGTGGCAGCGTATTTCTCGGAAGCCATATCCGCAAGGCTGGTGAGCTCTTGCCTCGGGATCTACGCAACGCTTCCGATCGTCCCTCACAGCCAGAAAGTGGCTTCGGCGTTTCAAGTCTTCAACGGAATCAGCCCCTTCGTGAAGTTCTCTCACTTCACCGCGAACCAGGCGATTCAAGAAGCGTTTGAGAGAGAAGAAAGGGTTCACATCATAGATCTAGATATAATGCAAGGCCTCCAGTGGCCTGGGCTCTTCCATATACTGGCTTCGAGGCCCGGTGGGCCTCCTTACGTGAGGCTAACGGGCCTCGGAACCTCGATGGAAGCGCTGGAGGCCACTGGAAAGCGGTTATCGGATTTCGCCAATAAGCTTGGGCTTCCGTTTGAATTCTTTGGGGTTGCTGAGAAAGTTGGGAATGTTGATCCTGAGAGGCTTAATGTTAGTAAGGCTGAGGCTGTTGCTGTTCATTGGTTGCAGCATTCTCTTTATGATGTTACTGGTTCAGACACAAACACTTTGTGGCTTTTGCAGAGGTTAGCACCCAAGGTAGTGACAGTGGTAGAGCAAGACTTAAGCAACACAGGTTCATTCCTGGGAAGATTTGTGGAAGCCATACATTACTATTCAGCACTATTTGACTCCCTTGGTTCAAGCTATGGAGAAGAGAGTGAGGAGAGACATGTGGTGGAGCAGCAACTGCTCTCGAGGGAGATCCGGAATGTTCTAGCTGTCGGGGGACCATCAAGGACCGGGGAGCCGAAGTTTCATAACTGGAGGGAGAAGCTTCAACAATGTGGGTTTAGAGGTATATCACTAGCTGGTAATGCTGCTACACAAGCAAGCTTGTTACTTGGTATGTTCCCTTCTGAAGGGTACACTTTGGTGGAGGACAATGGGATTCTTAAACTTGGTTGGAAGGATCTTTGTTTGCTCACTGCTTCAGCATGGAGACCACCTTATACCACTGCAATTGCTCATCATATTTAA 1710 0.4971 MDETSAAANWIDGILKDLIHTSNTVSIPQLINNVREIIYPCNPNLAMLLEYRLRLLTTTDSSSASAVAVAAATASTPPLPPPPNKTQLMKQTNSPHMHAYSTMHFQDSSPVSQYWPVVPPPPLDSNNNNSVSLANTLQSPPPPPPPPPTQQEKPPQEEDLVPATTTATPRNTTTATEMAMLARKKAEEVNQQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPIVPHSQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFGVAEKVGNVDPERLNVSKAEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPYTTAIAHHI 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90709g00019 569 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 177 553 IPR005202 -
Stsc90709g00019 569 Pfam GRAS domain family 203 558 IPR005202 -
Stsc90709g00019 569 ProSiteProfiles GRAS family profile. 193 558 IPR005202 -
Stsc90709g00019 569 MobiDBLite consensus disorder prediction 115 173 - -
Stsc90709g00019 569 MobiDBLite consensus disorder prediction 137 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90709g00019 Stsc-Chr90709 121469 124357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90709g00019 200 558 GRAS Transcription Factor Family AT5G41920 57.065 2.81e-143 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc90709g00019 GRAS 6e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90709g00019 - - gmx:100806779 805.053