Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90709g00017 ATGGCACAGGAAAATAAGGGTAGAGTTTGTGTGACTGGAGGCACAGGTTTTCTTGGTTCATGGCTCATCAAAACACTCCTTGAGGATGGTTATACTGTTAACACAACTGTTAGATTTGATCCAAAAAGGAAGAGAGACATAAGCTACCTCACAAACCTACCAAATGCATCAGAAAACCTAAAAGTGTTCAATGCTGATCTGAGCAAGCCAGAGAGTTTCAAAGAAGCAATTCAAGATTGCATAGGGGTATTCCACGTGGCATCACCAATAGACTTCGAAGTGAACGAGCCGGAAGAAACAGTGACAAAGAGAACCATTGATGGAGCCTTAGGGATCTTAGAAGCATGCAAGGATTCAAAGACAGTGAAGAGGGTTGTTTACACTTCAAGTGGATCTGCTGTTTGCTGCAAAGAATATGAGGATGAGGGTGATGGTTTTGATGAGAGTAGTTGGAGTGATGTTGATTTTCTTAGGAAGGTGAAGCCATTTGGATGGTCCTATGCGGTTTCAAAGACATTGACTGAGAAAGCCATGCTTGAGTTCGGAGAAAACAATGATAATGGTTTGGAAGTTGTGTCTTTGATTGCTCCTCTTATTGTTGGACCTTTCATTTGTCCAAAGCTTCCTGATTCTGTTGAGAAAGGACTTGTTTTGCTCTTAGGTAACAAGGATAAAATTAGTATCACTAATTTCCATATGGTGCATGTTGATGATGTAACTAGAGCACATATATTATTGCTTGAGCATCCTAACCCTAAAGGCAGATATAATTGCTCACCATTTTCCATAAGTATTGAAGAAATGGCTCAAATTCTTTCAGTCATGTACCCAGAATTTGAAATACCACCAATAGATGAGCTTAAGGAAATTAAAGGGTTTAAGCTACCACGTTTAATCTCAAACAAACTGATAGAAGCTGGATTTGAGTTCAAGAACAACATTCAGGATATGTTTAAGGATGCAGTTGAATGCTGCGTTGATAAGGGATTTCTTTCGGATCCATCCATCTCTAATTAA 1017 0.3923 MAQENKGRVCVTGGTGFLGSWLIKTLLEDGYTVNTTVRFDPKRKRDISYLTNLPNASENLKVFNADLSKPESFKEAIQDCIGVFHVASPIDFEVNEPEETVTKRTIDGALGILEACKDSKTVKRVVYTSSGSAVCCKEYEDEGDGFDESSWSDVDFLRKVKPFGWSYAVSKTLTEKAMLEFGENNDNGLEVVSLIAPLIVGPFICPKLPDSVEKGLVLLLGNKDKISITNFHMVHVDDVTRAHILLLEHPNPKGRYNCSPFSISIEEMAQILSVMYPEFEIPPIDELKEIKGFKLPRLISNKLIEAGFEFKNNIQDMFKDAVECCVDKGFLSDPSISN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90709g00017 338 Gene3D - 6 331 - -
Stsc90709g00017 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 325 IPR036291 -
Stsc90709g00017 338 Pfam NAD dependent epimerase/dehydratase family 9 257 IPR001509 -
Stsc90709g00017 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 322 - -
Stsc90709g00017 338 FunFam Dihydroflavonol reductase 6 333 - -
Stsc90709g00017 338 CDD FR_SDR_e 9 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90709g00017 Stsc-Chr90709 105146 108120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90709g00017 1 331 Monolignol Biosynthesis Gene Families AT2G02400 36.446 1.21e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90709g00017 - K13265 gmx:100793687 483.411