Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90709g00011 ATGAGTGTTCGCGCTGGCGGCGGTAGCAGGAGGGGTATCAACAGTAGAAAATTCAATGGCGGTGGTGGTCCTTGTGGTGCCTGTAAGTTTCTGAGGAGAAAATGTTCGTCAGAATGTATCTTTGCTCCGTACTTTGATTCAGATCATGGTTCATCCTACTTCGCATCGGTACACAAGATTTTTGGTGCTAGTAACGTTTCTAAGCTCCTTTTAAAAGTTCCACCTAATAGGAGGCTAGACGCAGTGATCACTCTTTGTTATGAAGCTCAATCAAGACTAAGAGATCCTGTTTCCGGTTGTGTGTCACAAATTGTTGCCCTTCAACAACAGGTGTCAACTTTACAGAATGAAGTCAATTACCTGCAAAATTATTTTGCTTCGGTGGAGATACCTCAACCGCCGTCAATTCCTCTGTCACAAGGAGTGGTGACACCATCTATGTACTCAATTGTTGACTTACCATCGGTCATCGCTGTTACCCCCGCAACCACACCCATGGTGGCGGCCCCCATTGATCCATCCCTCTTTGATCCGTCGATGGTTCGATCTTCTTGGGCCATGCAGCAACAGGCCATGATGGACCCACGCCATTACATGCCTGCTACTTCTGGCCCACTGGGCCCAATTGGTCTTGGCCTTGGTGTTGATGGAGTTGTTGATCTTCCAACTGTTGCACGTGATCTCATCAGTCGACACGTGCCTCCGCAAGCACTTGGTCAGGCTTCTGGTTCAAATGCTCCATCACTTAGATCAATGTGA 759 0.4783 MSVRAGGGSRRGINSRKFNGGGGPCGACKFLRRKCSSECIFAPYFDSDHGSSYFASVHKIFGASNVSKLLLKVPPNRRLDAVITLCYEAQSRLRDPVSGCVSQIVALQQQVSTLQNEVNYLQNYFASVEIPQPPSIPLSQGVVTPSMYSIVDLPSVIAVTPATTPMVAAPIDPSLFDPSMVRSSWAMQQQAMMDPRHYMPATSGPLGPIGLGLGVDGVVDLPTVARDLISRHVPPQALGQASGSNAPSLRSM 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90709g00011 252 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Stsc90709g00011 252 PANTHER LOB DOMAIN CONTAINING PROTEIN 21 127 - -
Stsc90709g00011 252 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90709g00011 Stsc-Chr90709 67112 72254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90709g00011 26 235 AS2 family AT2G45420 49.537 1.07e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc90709g00011 LOB 6.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90709g00011 K21994 - rcu:8270648 224.557