Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90706g00006 ATGGCTGATCAGCCGCAAGGTGGTGAGGGCAGCAGGCGTAGAAACACTAGGGATGCGAGGCGTGGCGCCGCTGCGCCTACTCAAGAGGGGGCGGCGCCATCGCAGTCTACTCCATGTGGTGCATGCAAATTCTTGAGGAGGAAATGTGTTACGGGGTGCATCTTTGCACCCCACTTTGGCTCGGATCAAGGCGCGGCCAAGTTCGCGGCGGTTCACAAGGTGTTTGGTGCTAGCAATGTGTCCAAGCTCTTGTTGCATATCCCTGCTAACCGCCGCAACGAAGCAGTGGCGACGATTTGTTACGAGGCTCAGGCAAGGCTATCCGATCCTGTTTATGGCTGTGTGTCCACCATTCTCTCTTTGCAACAACAGGTGGCATCTTTGCAGGCAGAGGTGGCCATAACTCAAACTCAAGTGATGAATGGTAGGATTGCATATGCAAATGCTCTTGAAACCACCCAGCAGCAGCAGCAACAGGCACTTCAGCAGCACCACCACCAAAACATGGTGAATAATATCAATATGGGGTTGTATCCAGCATTCTCAAACAGCTCATCTGCCTCCACTAACCTTATGAACATCAGCACCAACAACTTCAACCCTGCCACCGGTGGTTTCGACCTCGCAATGGAGGCGGCAGCAGCACCCTCATCATCTCACAGCATTCATCCACTTCATCATAATAATTTCTCTCGCTATGATGATGATGATGAACAAGAAAGCAAGATCCCCCCAGTCTTTAACCCTGATCTGTAG 756 0.5172 MADQPQGGEGSRRRNTRDARRGAAAPTQEGAAPSQSTPCGACKFLRRKCVTGCIFAPHFGSDQGAAKFAAVHKVFGASNVSKLLLHIPANRRNEAVATICYEAQARLSDPVYGCVSTILSLQQQVASLQAEVAITQTQVMNGRIAYANALETTQQQQQQALQQHHHQNMVNNINMGLYPAFSNSSSASTNLMNISTNNFNPATGGFDLAMEAAAAPSSSHSIHPLHHNNFSRYDDDDEQESKIPPVFNPDL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90706g00006 251 MobiDBLite consensus disorder prediction 1 37 - -
Stsc90706g00006 251 ProSiteProfiles LOB domain profile. 37 139 IPR004883 -
Stsc90706g00006 251 Pfam Lateral organ boundaries (LOB) domain 38 136 IPR004883 -
Stsc90706g00006 251 PANTHER LOB DOMAIN CONTAINING PROTEIN 35 201 - -
Stsc90706g00006 251 Coils Coil 118 138 - -
Stsc90706g00006 251 MobiDBLite consensus disorder prediction 227 243 - -
Stsc90706g00006 251 MobiDBLite consensus disorder prediction 218 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90706g00006 Stsc-Chr90706 26629 30498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90706g00006 1 241 AS2 family AT3G03760 50.000 1.11e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc90706g00006 LOB 4.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90706g00006 - - aprc:113866578 260.766