Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90703g00028 ATGCCACAGATAATCTCCAAAGTAGTCAACCACACAGTCCATGAAGTCAAATCTTCATCCAACAACTGCACCACCATAATCAAGCATCTCCAAAACACTCTCAACACACTTGAGAAGAGAGCCTTAGATGATTGTCTCAAACTCTTTGATGACACCATAGCAGAACTCAACACCACCATTCTTGATCTCTCAAAAAAGCCATCATACAGCAATGATTTGCAAACTCTGCTAAGTGGAGCAATGACAAATCTGTACACTTGTCTTGATGGTTTCTCAGAAAGCAAAAATGGGAATGCTGTGAGAGGGTTGATAGAGCAGAAAGTGATTGAGATATCACACCATGTTAGTAACTCATTGGCAATGCTGAACAAAGTGAAAAGAAGTTTGAAGAAGAAAGAAGAAGAGGTGTATGCTGAGTATGGGAGAATGAAGAAAGGGTTCCCTTCTTGGGTTTCTGCTAAGGATAGGAAACTTCTAGAAGGTAGTAATGTGAATGAGAGTAAGGTTGATGTTGTTGTGGCTAAAGATGGTTCTGGAAATTTCACTACTATTGCTGAAGCTGTAGATATGGCTCCTAATTCCAGCACAACCAGGTTTGTGATATACATAAAAAGTGGAGCATACTTTGAGAATGTGGAAGTGATTAGAAAGAAGATTAATGTGATGTTCATTGGAGATGGGATTGGAAGGACAATTGTAAAGGCAAACAGGAATGTTGTGGATGGATGGACCACTTTTCAATCAGCTACTGTAGCTGTGGTAGGGCAAGGTTTCATAGCTAAGGGTATAACGTTTGAGAATTCAGCCGGGCCAGACAAGCACCAAGCAGTGGCACTCCGAAGCAGCGCCGACTTCTCGGCCTTCTACAAATGCAGCTTTGTTGGTTACCAAGACACACTCTATGTCCACTCCCTCCGCCAATTCTACCGCGAATGCGATATTTATGGCACAGTTGACTTCATATTTGGCAACGCCGCCGTAGTTTTCCAAAATTGCAACCTCTATGCTCACAAACCTAATGAGAATCAAAAGAACTTGTTCACAGCACAAGGAAGAGAAGATCCGAATCAAAACACCGGAATTTCAATCTTGAATTGCAAGATCGCCGCCGCATCCGACCTAATTCCGGTCAAATCTTCGTTCAAAAGCTACTTAGGAAGGCCATGGAAACAATACTCTAGGACAGTGTACCTTAGATCTTACATGGAGGATTTAATTGACCCTAAAGGATGGTTGGAATGGAATGAGACGTTTGCATTGGACACACTTTATTATGGTGAGTATATGAATAGAGGACCAGGTTCAAACACAAGTGGGAGAGTTAATTGGCCAGGTTATAGGGTTATTAATAGTTCTAATGAAGCAAGCCAATTCACTGTTGGCCAATTCATACAAGGTAGTGAGTGGTTGAACAACACTGGCATTCCATTTTTCTATAATTTGAGTTAA 1449 0.4141 MPQIISKVVNHTVHEVKSSSNNCTTIIKHLQNTLNTLEKRALDDCLKLFDDTIAELNTTILDLSKKPSYSNDLQTLLSGAMTNLYTCLDGFSESKNGNAVRGLIEQKVIEISHHVSNSLAMLNKVKRSLKKKEEEVYAEYGRMKKGFPSWVSAKDRKLLEGSNVNESKVDVVVAKDGSGNFTTIAEAVDMAPNSSTTRFVIYIKSGAYFENVEVIRKKINVMFIGDGIGRTIVKANRNVVDGWTTFQSATVAVVGQGFIAKGITFENSAGPDKHQAVALRSSADFSAFYKCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYAHKPNENQKNLFTAQGREDPNQNTGISILNCKIAAASDLIPVKSSFKSYLGRPWKQYSRTVYLRSYMEDLIDPKGWLEWNETFALDTLYYGEYMNRGPGSNTSGRVNWPGYRVINSSNEASQFTVGQFIQGSEWLNNTGIPFFYNLS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90703g00028 482 Pfam Plant invertase/pectin methylesterase inhibitor 8 121 IPR006501 GO:0004857
Stsc90703g00028 482 PANTHER PECTINESTERASE 3 471 - -
Stsc90703g00028 482 SMART PMEI_2 4 121 IPR006501 GO:0004857
Stsc90703g00028 482 FunFam Pectinesterase 164 481 - -
Stsc90703g00028 482 Pfam Pectinesterase 170 466 IPR000070 GO:0030599|GO:0042545
Stsc90703g00028 482 NCBIfam pectinesterase inhibitor domain 6 124 IPR006501 GO:0004857
Stsc90703g00028 482 ProSitePatterns Pectinesterase signature 2. 314 323 IPR033131 -
Stsc90703g00028 482 SUPERFAMILY Pectin lyase-like 167 479 IPR011050 -
Stsc90703g00028 482 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 128 IPR035513 -
Stsc90703g00028 482 Gene3D - 164 481 IPR012334 -
Stsc90703g00028 482 CDD PMEI-like_3 3 124 - -
Stsc90703g00028 482 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 8 125 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90703g00028 Stsc-Chr90703 127307 131927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90703g00028 3 481 Carbohydrate Esterase AT4G02320 55.010 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90703g00028 K01051 - gmx:100802881 771.155