Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90703g00014 ATGCGAGTTTCGCTCTCACGCTCACTCCGTTTAGCTTCTCTCCTCACCAAACCAAAATCGTTTCAATTCCACCACTTCACCACCACCACCACCGCCACGCCGGAACAATCCTCCGATTCCACTCGGGACAGACCCGATCCGCCTCCTATTCGAGTCGGGCTCACAGACTCGGCGGGGCGCGGTGTCTTCGCCACCCGTCCGATCGGCGCCGGAGAACTCATCCACACTGCGAAGCCCGCCGTATGCTACCCTTCTCTCAACGTTCTCCACACTGTGTGTTACTACTGCCTCCGCAGAATCTCTAATCCCAATGGCGCCGAAGCTCAACGCGTGTCGTTTTGCAGCGAAGATTGTAAACGACGCTGCATGGAATTTTACGATGTTGAGACGAAAGCAGATTGGGCGGCCTTTGATGACTATTGCAGGACCCATGATTTGAAATATCCTTTCATGGTGAAGCGGTTGGCTTGCATGATCATATCAGGAGTTGCCAGCAGTGACATTCTAGACATACTTCAACCTGCCAATTTGACATCTCAGATGATTTCACGGATGGAAGAAGAGTATGGCTTGTTAAGGAATGCTTTCAGAAAGACTCTTATTTCAGATGAACATGTTGCTTTTTTAACCAAGCAATGGTACATTGGTGTTTTGGCACGAATTCGAATCAATGCATTTCGCATTGAGTTGGCTGCAGGGCTATATGAAGATCTTCTTTCATCAGCAGCGGCATCTGTAGAAGCTGAAGCTGCCGTGGGGCATGCTGTCTATATTCTTCCGTCCTTCTACAATCATGATTGTGATCCAAATGCGCACATTATATGGATAGATAATGCGGATGCAAAATTGAAGGCCCTCCGTGACGTTGACGAAGGCGAAGAACTTAGAATCTGCTACATTGATGCCAGCCTGGACCGCGATGCTCGGCAAGAACTTCTGTCTCGGGGTTTTGGTTTTCAATGCAACTGTAACAGGTGCTTACATGGAGATTAA 993 0.4884 MRVSLSRSLRLASLLTKPKSFQFHHFTTTTTATPEQSSDSTRDRPDPPPIRVGLTDSAGRGVFATRPIGAGELIHTAKPAVCYPSLNVLHTVCYYCLRRISNPNGAEAQRVSFCSEDCKRRCMEFYDVETKADWAAFDDYCRTHDLKYPFMVKRLACMIISGVASSDILDILQPANLTSQMISRMEEEYGLLRNAFRKTLISDEHVAFLTKQWYIGVLARIRINAFRIELAAGLYEDLLSSAAASVEAEAAVGHAVYILPSFYNHDCDPNAHIIWIDNADAKLKALRDVDEGEELRICYIDASLDRDARQELLSRGFGFQCNCNRCLHGD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90703g00014 330 CDD SET_SMYD 253 326 - -
Stsc90703g00014 330 Gene3D SET domain 61 326 IPR046341 -
Stsc90703g00014 330 MobiDBLite consensus disorder prediction 28 52 - -
Stsc90703g00014 330 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 328 - -
Stsc90703g00014 330 SUPERFAMILY SET domain 47 326 IPR046341 -
Stsc90703g00014 330 SMART set_7 48 306 IPR001214 GO:0005515
Stsc90703g00014 330 Gene3D - 144 225 - -
Stsc90703g00014 330 ProSiteProfiles SET domain profile. 48 300 IPR001214 GO:0005515
Stsc90703g00014 330 Pfam SET domain 59 299 IPR001214 GO:0005515
Stsc90703g00014 330 Gene3D - 92 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90703g00014 Stsc-Chr90703 57763 61024 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc90703g00014 SET 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90703g00014 - - qsa:O6P43_009439 440.269