Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90701g00001 ATGGGCATAGGTAGGAAAGTTGTGTTGTACTCTTATTGGTTAAGCTCTTGCTCATGGCGTATCCGCTTTGCTTTGTCCCACAAAGGGATTCCTTATGAGTATAAAGCAGTGGATCTTGTTAAAGGAGAACAGTTTAGTCCAGAGTTTGAGAAATTGAATCCTCTGCATTGTGTTCCGGTATTAGTTGATGATAATGTGGTGGTTTCAGACTCTTATGCAATATTTCTGCATTTGGAGCAAAAGTATACTCGAAAGCCACTTTTGCCTGTTGATCCTCAGATCAGAGCTCTCAATCTTCAGATAGCAAGTGTGATCAACTCCAGCATTCAACCTCATCATATGATTGGTGCTTTGAAAGATATGGAGAAAATGTTTGGTGCTGAAACAAAACAGTGGGCTCAATATAAGATAGACAAAGGTTTCTTGGCTCTTGAGAAGTTAACGAAGAATGTTGCTGGAACATATGCAACAGGGGAACGTATCTATATGGCTGATGTATTCTTGGCTCCACAGATTATGCAGGCAGTTAATAGGTTTGATATTGATATGTCCAAATATCCTACTCTGAGAAAGCTGTCTGAAACATATAAAGGATTGGCAGAGTTTCATGCGTCATCACCACAAAGTCAACCTGATGCTTGCACTACCGTTGACTAG 657 0.4018 MGIGRKVVLYSYWLSSCSWRIRFALSHKGIPYEYKAVDLVKGEQFSPEFEKLNPLHCVPVLVDDNVVVSDSYAIFLHLEQKYTRKPLLPVDPQIRALNLQIASVINSSIQPHHMIGALKDMEKMFGAETKQWAQYKIDKGFLALEKLTKNVAGTYATGERIYMADVFLAPQIMQAVNRFDIDMSKYPTLRKLSETYKGLAEFHASSPQSQPDACTTVD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90701g00001 218 CDD GST_N_Zeta 8 79 IPR034333 -
Stsc90701g00001 218 FunFam Maleylacetoacetate isomerase 90 216 - -
Stsc90701g00001 218 Gene3D Glutaredoxin 9 84 - -
Stsc90701g00001 218 NCBIfam maleylacetoacetate isomerase 9 213 IPR005955 GO:0003824|GO:0005737|GO:0009072
Stsc90701g00001 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
Stsc90701g00001 218 Gene3D - 88 215 - -
Stsc90701g00001 218 SUPERFAMILY GST C-terminal domain-like 86 212 IPR036282 -
Stsc90701g00001 218 SFLD Main (cytGST) 8 193 - -
Stsc90701g00001 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 86 IPR004045 -
Stsc90701g00001 218 SFLD Glutathione Transferase (cytosolic) 8 193 IPR040079 -
Stsc90701g00001 218 SUPERFAMILY Thioredoxin-like 7 89 IPR036249 -
Stsc90701g00001 218 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Stsc90701g00001 218 PANTHER MALEYLACETOACETATE ISOMERASE 7 213 - -
Stsc90701g00001 218 Pfam Glutathione S-transferase, N-terminal domain 9 85 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90701g00001 Stsc-Chr90701 17101 20284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90701g00001 6 217 Glutathione S-transferase Gene Family AT2G02380 48.357 1.90e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90701g00001 K01800 - gmx:100796296 326.25