Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc906g00003 ATGAACCCCCACTTCTGTCGCGGCTCCCTCCGTCAACCCCAACCTCCGTCGCGTCCTCTTCACGGCCATCGGTGCTCCCTCCGCTGCTGCTCCCTGTTCATTACTCATCACGGGGAAATAGAGTCCATTGCAACCTCCGTTCGCCGTCGCTCCATCCGTCGCCCTCCGCTGGAGTTGTCTGCTGGATTCGTCGCCTGGAGAAGAATGCCGGAAGAGGGCAAAGAAGGAATCGAAGAAGGAAAGGAAAGAGAGGACATGAGGTACCAAATCAAGATTCCGTTGGGGGATTCTGTGGTTTTGCATAGTAAAGGATTTCTACAAGGCTTTAAGGGAATCCCTCATCCTTATGATAAAACCAAGACGGAGGTTATTCATGATGCTCTCAAGGTTTTGAGGCTTCAGAAGGGACCAAAATTCTGCTTGCTTGGAACTGGAGAAGAAGAAGAAGAAAGGGAAGGCGCATTTGTTGTAAAGAGAAGGAAGCAGTTGAGGGTGAAAGCTGAGAAGGTTGCTAAGGAAAAGCTTGTCGCAAAGCCACTGGTTGCCGATAGTAGTGCAAAGTCCCATGAATTATCCCTTGCTTATGAGCGGTACTCCCTTCAGAAACTTGAACCTCCTCTTGTTCTTCAGGAGTTTGTCAACCATGTAGTTTCTTCGCCAGAAATCGTCAAAGAATTTCTCAAAACACACGAATCTACCTTCTCTAATCACCTCACACTGAGTGCAATAGATTACATAACTTATGGCTCAAAGGGGATGGTATTTGCTCCTTATGGAAGTTACTGGAAGTTTTTGAAGAAGCTTTGTATGTCAGAACTTCTCGGCGGGAGAACCCTAGACCGATTTCTTCCTTTAAGACGTGAAGAGACTCTGAGATTCCTCAAAGCCTTGCAGAAGAAAGGGGAAGCCAGAGAAAGTGTTGATATTAGTGGTGAACTTATTACTCTCACTAATAACGTCATTTCAAGAATGACAATGAGCGTAAGGTGTTGCGAAGAAGGAGCCAATTCGGATGATACAGAAAAGATAAGGGAGATGGTGAAAGAGGTTATGGAGCTAGCTGGAAAGTTAAATAATATTTCGGATTTTATTTGGTTGTTTAAGAATTGGAACTTGCAAGGGATGAATAAGAGGCTTAAAAAGGTTAGGGAGAGGTTTGATTCAATGATGGAGAGAATCATAAGGGAGCATGAATTGGTAAGGAAGGAAAAAAAGGAAAAAGGAGATAATAATGGAGGTGGAAAAGTGAGGGATTTGCTTGATATTTTGCTAGAAATACACGAAGATAATCAGATAATTGACGAGATTCAATTCACTATGGAGAATATCAAGGCTTTCATTTTGGAATTATTTATATCAGGAACTGACACATCAGCTACTACAATCGAATGGGCTTTAGCAGAGTTAATTAACAACCCGCATGTGATGAAAAAAGCAAGACAAGAAATCGATTCAGTAACTGCAAACAATAAATTAATACAAGAATCAGATGTAGCTAATCTTCCTTATTTGCAAGCCATTATTAAAGAAATACTAAGACTTCATCCTGTAGTTCCACTTTTTAATAGACAATCAACTGAAACCTCTATCATATGTGGCTATAAAATTGCATCAAAGACCACATTATTTACTAATTTGTGGTCTATGGGTAGAGACCCCAAGATTTGGAAGAACCCACTTGAGTTTAGGCCTGAGAGGTTCATTGATGAAGAAAGACAATTATTGGATTTGAGGGGCAAAATTTTCAATTATTGCCATTTGGGACTGGAAGAAGAATGTGTCCTGGGGCTTCACTAG 1797 0.4174 MNPHFCRGSLRQPQPPSRPLHGHRCSLRCCSLFITHHGEIESIATSVRRRSIRRPPLELSAGFVAWRRMPEEGKEGIEEGKEREDMRYQIKIPLGDSVVLHSKGFLQGFKGIPHPYDKTKTEVIHDALKVLRLQKGPKFCLLGTGEEEEEREGAFVVKRRKQLRVKAEKVAKEKLVAKPLVADSSAKSHELSLAYERYSLQKLEPPLVLQEFVNHVVSSPEIVKEFLKTHESTFSNHLTLSAIDYITYGSKGMVFAPYGSYWKFLKKLCMSELLGGRTLDRFLPLRREETLRFLKALQKKGEARESVDISGELITLTNNVISRMTMSVRCCEEGANSDDTEKIREMVKEVMELAGKLNNISDFIWLFKNWNLQGMNKRLKKVRERFDSMMERIIREHELVRKEKKEKGDNNGGGKVRDLLDILLEIHEDNQIIDEIQFTMENIKAFILELFISGTDTSATTIEWALAELINNPHVMKKARQEIDSVTANNKLIQESDVANLPYLQAIIKEILRLHPVVPLFNRQSTETSIICGYKIASKTTLFTNLWSMGRDPKIWKNPLEFRPERFIDEERQLLDLRGKIFNYCHLGLEEECVLGLH 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc906g00003 598 PRINTS P450 superfamily signature 506 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 PRINTS P450 superfamily signature 453 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 MobiDBLite consensus disorder prediction 1 22 - -
Stsc906g00003 598 SUPERFAMILY Cytochrome P450 214 573 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 Gene3D - 144 213 - -
Stsc906g00003 598 PRINTS E-class P450 group I signature 505 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 PRINTS E-class P450 group I signature 462 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 PRINTS E-class P450 group I signature 442 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 PRINTS E-class P450 group I signature 222 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 PRINTS E-class P450 group I signature 545 569 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 Coils Coil 476 496 - -
Stsc906g00003 598 Gene3D Cytochrome P450 214 584 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 207 571 - -
Stsc906g00003 598 Pfam Cytochrome P450 214 572 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc906g00003 598 Coils Coil 372 392 - -
Stsc906g00003 598 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 173 215 IPR040464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc906g00003 Stsc-Chr906 12529 20375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc906g00003 207 575 Cytochrome P450 AT5G06900 44.986 1.58e-106 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc906g00003 K24188 - gmx:100805931 454.136