Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90699g00011 ATGGCTGCTACATCACATGATCAAAATGATGGAACAGTTTCAATTTCAAGGGTTGTGTCTGTGCATCCAAAGATTCAACAACCTCAAAGGGTGTTGAGCCTCTCAAATTTGGATAGGCAGTGTCCAAGGCTGATGCACTTGGTGTTCTTCTACAACAACTTGAATGATTTGTCCCTCAATTCAGTATTCAACAGCTTGAAAAATGGGTTGGAAGAGACCTTGGTTTTGTGGTACCCTGGTGCTGGAAGGTTGATGAAGATGAACCCTAATAATAATAACAATAATAATGATAATAATAATCAAAGTGGTAATGGAAAGCTCAATGTTTGGTGCAATAACCAAGGTGCAATTCTTGTGGAGGCTGAGACCAAAGCTAGAATCTCACAACTTGGGGATCTTTCTCAGTACAATGAGTTCTTTGAGAACCTTGTTTATAAGCCTGATTTTGATGATGCCAATTTCTCAAACATGCCTTTGATTGTTGCTCAGGTAACAAAATTTGGTTGTGGAGGGTATTCAATTGGAATTGGAACAAGCCACTCACTATTTGATGGACCAGCAACTTATGATTTCTTATATGCATGGGCTTCAAATTCTGCAATCTTGAAGGGTATCATAATTAGGCCTCTTGAGCTTCCAAAACCAGTGCATGAGAGGGGAATACTTCTAAGTAATGGTGGTAATAATAATAGCCAACAACTTTCAAAAGGGTCTATGAATTTGCCTTCAAGTTCCAGTTTTTATGCTCATCATCAACCAATTAGGGCTATGGCAGTACAACATTTATATCAGCTCATAATGCAAGCAACTGCAGCAGCTTCACTTCAAAGTAGTATTAGTGAAACCTCTGAAAGAAATAATAATAATAATAATTATCAACAGAAGTGGGTTCTTAAGACCTATCATCTATCTGCTGCAATGATAGATAACTTGAAAAGGAAGTACTTATCTTCCACCAAGAGAGATTCTCTTCCATTCTCAACATTTGAGGTTCTTACAGCTCACCTCTGGAAGGCAAGGACAAAAGCTTTAGGGCTGAGCAAAGAAAAGCTAGTATGTCTTCAATTTGCTGTGGACACAAGGAACAAGACGGTTCCTCCATTACCAAAAGGCTTCAGTGGTAATGCTTATGTTCTTGCCTCAGTTATGATGCCTGTCTCACAATTATTGGACAACAATTCTACCCTTGAATTCATCATTGAGAAAATCAGAGAAGCCAAGAATGCTGTGAACCACAGCTATGTCAAATCATACATTGATGCCTTGGAATTAGGTTCTGATAATAACAATTCTCTTCCTCCACTTAAGGAACTAACTCTTGTTAGTGATTGGACGAGAATGCCCTTCCACAAGATTGAGTTCTTTCATGGAAGAAAAGCAGCTTATGCTTCTCCACTTGCCACTCCTGTTCCTCAGGTTGCTTATTTCATGCAGAGTCCTTCTGATGTTGGTGCTGTTGATCTCAGGATTGGATTTCAAGATGGGAATACCCTAACTGCTTTCACTCAATGCTTCTTCTTCATCTAA 1527 0.3903 MAATSHDQNDGTVSISRVVSVHPKIQQPQRVLSLSNLDRQCPRLMHLVFFYNNLNDLSLNSVFNSLKNGLEETLVLWYPGAGRLMKMNPNNNNNNNDNNNQSGNGKLNVWCNNQGAILVEAETKARISQLGDLSQYNEFFENLVYKPDFDDANFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYAWASNSAILKGIIIRPLELPKPVHERGILLSNGGNNNSQQLSKGSMNLPSSSSFYAHHQPIRAMAVQHLYQLIMQATAAASLQSSISETSERNNNNNNYQQKWVLKTYHLSAAMIDNLKRKYLSSTKRDSLPFSTFEVLTAHLWKARTKALGLSKEKLVCLQFAVDTRNKTVPPLPKGFSGNAYVLASVMMPVSQLLDNNSTLEFIIEKIREAKNAVNHSYVKSYIDALELGSDNNNSLPPLKELTLVSDWTRMPFHKIEFFHGRKAAYASPLATPVPQVAYFMQSPSDVGAVDLRIGFQDGNTLTAFTQCFFFI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90699g00011 508 Pfam Transferase family 277 494 - -
Stsc90699g00011 508 Pfam Transferase family 16 199 - -
Stsc90699g00011 508 Gene3D - 272 505 IPR023213 -
Stsc90699g00011 508 Gene3D - 8 231 IPR023213 -
Stsc90699g00011 508 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90699g00011 Stsc-Chr90699 112303 116787 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90699g00011 13 493 Monolignol Biosynthesis Gene Families AT5G48930 23.327 1.77e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90699g00011 K15400 - gmx:100779295 612.068