Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90697g00005 ATGCAACCAGAGCATTACTTCCAGGAGAAGTTCATGTTCCCCGTTTCCGTCGACGAAGATGACAAAGCCACCGAGTTCCGTCCGTTATCGGCAGCACGGCCACACATGCTTGCGTTCCACCTGGCATGGCTGAACCTCTTCTCCTGCTTCTTCTCCACCTTTTCCATCCCCCCGCTCCTCCCCATCATCCGTGAAGACCTCAAACTCACCGCCGCCGACATAGGTGCCGCTGGCACCGCCTCCTTTGCCGGCTCCATCTTCTCCCGCCTCCTCATGGGACCCACCTGTGACCTCGTCGGCCCCCGCATAGCCTCTGGCACGCTCTCCCTCCTCACCGCCCCAATCATCCTCGCCACTTCACTAGTCTCCACACCCACCTCCTTCATCGTCATCCGCTTCCTGGTCGGCTTCTGCCTCGCCAACTTCGTATCCAGCCAGTTCTGGATGAGCTCCATGTTCTCCGGGAACGTTGTTGGCCTTGCCAACGGCGTTGTCGCAGGCTGGGCCAACGTTGGCTCTGGCGTGACCCAACTCGTCATGCCCGTCGTCTACTCCCTCTTCATCTCACTCTTCAACCTCTCTTCCTCCACCGCATGGCGCTTATCATTCATAATCCCGGCAATCTTCCAAGCCACCACTGGAACCTTGGTTTTGTTATACGGTCAAGATCTTCCTTCTAGTTATAACCACAACACCAAGAAAGGTACTAATAATCCAAAGGAGAGTGTTTCTGTTGTTGTGTTCCGTGGGTTATCGAATTACAGAGGATGGATTCTGGGGTTGCTCTATGCGGCGTCGTTTGGGGTGGAGCTTACGATGGACAACATAATAGCGGAGTATTTCTATGACAGGTTCGGGGTGAATGTTCAGACGGCGGGGACCATTGCGGCATGTTTTGGGATGGCGAATCTGTTTTCGAGGCCAATGGGGGGAGTGATGTCTGACAGGATGGGCAAGAGGTTCGGGATGAGAGGGAGGCTTTGGGGGCTGTGGGCGGTTCAGACGGTAGCGGGTTTGTTTTGTGTGTTGCTCGGTCGAGTTAACTCGCTTTGGAGCTCGGTGCTTGTCATGTGCTGCTTTTCTGTGTTTGTTCAAGCTGCTTCGGGCCTCAACTTTGGCGTCGTTCCTTTCGTTTCAAAGAGAAGGCAGTTGCGGGAAGATAATCGCGACGAACACCCGGGCAGGGCCGGGCTCGATGCGCAGGCAGCCCTGTTCCGCCGGAAGGGGAAGACTTACACCGTCTCAACCGCGAGTGGCACATCGCGGGAGCCCTGA 1275 0.56 MQPEHYFQEKFMFPVSVDEDDKATEFRPLSAARPHMLAFHLAWLNLFSCFFSTFSIPPLLPIIREDLKLTAADIGAAGTASFAGSIFSRLLMGPTCDLVGPRIASGTLSLLTAPIILATSLVSTPTSFIVIRFLVGFCLANFVSSQFWMSSMFSGNVVGLANGVVAGWANVGSGVTQLVMPVVYSLFISLFNLSSSTAWRLSFIIPAIFQATTGTLVLLYGQDLPSSYNHNTKKGTNNPKESVSVVVFRGLSNYRGWILGLLYAASFGVELTMDNIIAEYFYDRFGVNVQTAGTIAACFGMANLFSRPMGGVMSDRMGKRFGMRGRLWGLWAVQTVAGLFCVLLGRVNSLWSSVLVMCCFSVFVQAASGLNFGVVPFVSKRRQLREDNRDEHPGRAGLDAQAALFRRKGKTYTVSTASGTSREP 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90697g00005 424 Gene3D MFS general substrate transporter like domains 242 404 IPR036259 -
Stsc90697g00005 424 FunFam Nitrate transporter 2.1 240 384 - -
Stsc90697g00005 424 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 382 IPR044772 GO:0015112
Stsc90697g00005 424 FunFam Probable high-affinity nitrate transporter 2.4 31 227 - -
Stsc90697g00005 424 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 424 IPR020846 GO:0022857
Stsc90697g00005 424 Pfam Major Facilitator Superfamily 43 367 IPR011701 GO:0022857|GO:0055085
Stsc90697g00005 424 CDD MFS_NRT2_like 39 382 IPR044772 GO:0015112
Stsc90697g00005 424 Gene3D MFS general substrate transporter like domains 32 233 IPR036259 -
Stsc90697g00005 424 SUPERFAMILY MFS general substrate transporter 18 379 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90697g00005 Stsc-Chr90697 32211 42467 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90697g00005 15 381 Inorganic Solute Cotransporters AT5G14570 64.062 1.14e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90697g00005 K02575 - qsa:O6P43_008930 561.222